Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01898 ATGGAGTCTTCTCCAGACGACATCGCCGACGACCTGCAAAGCCTCAGCTTCAACTCTACTAACACCAACCGCAGCACCAGCTCCGGCTCTGAGACCACTCTCACCGCCTCCTCTTCCTCCCTTAACATCCCTTCCATTCTCAGTAAACCTCACGCGCCTTCCTCCGACCCTTGCTGGTCCGCTGTTAACCGGATCCGATCCGAATCTTCGTTTCGCCAACTCGCCTTCTCTGACCTTAAGTTCTTCCACCGCCTCGGCTCCGGTGACATTGGCTCCGTCTACCTCTCCGGTCTCAAGTCCGCTGGAACTGATGGATGCTTGTTTGCGGCGAAGGTAATGGATAAGAAGGAACTGGCGAGTCGGAGTAAAGAAGGAAGAGCGAGGACTGAGAGGGAGATTTTGGAGTCTTTGGACCATCCATTTCTACCGACGCTTTATGCTAGTATCGACTCACCGAAGTGGCTCTGTCTCTTGACGGAGTTTTGTCCCGGCGGCGACCTCCATGTTCTCCGACAACGGCAACCTAACAAACGATTCGATGAACTCGCCGTGAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAATACCTTCACATGATGGGGATCGTTTACCGCGATCTGAAGCCGGAAAATGTACTGGTACGATCGGACGGCCATATCATGCTCACTGATTTTGATCTCTCTTTGAAGTGCGAGGATTCAACGGCGACCCCACAGGTTATCAATGCTAAAAATCCGATGAATGGCACCGCCCCGTTAAAGGACTATCAAATTGATGCCCCTCCTTTCACATCATCCTCGTGCATACTTCCAAACTGTATAGTCCCCGCTGTGTCATGTTTCAACCCAAAACGCAAGCGAAAGAAGAAGTCTGGACATCGGAATGGACCCGAGTTTGTCGCTGAACCAGTTGACGTCCGGTCAATGTCATTTGTCGGTACCCACGAGTACTTGGCACCGGAGATTGTCTCAGGTGAGGGTCATGGAAGCGCAGTGGACTGGTGGACTTTAGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTGACCTTGGCCAATATAGTTGCTAGAGCTCTTGAGTTCCCTAAGGAACCAGCAGTGCCAACAGCAGCTAAGGACCTCATCTCTCAGTTATTGATCAAAGACCCGTCGAGACGGCTGGGATCAACGACAGGGTCATCGGCGATCAAGCACCATTCATTTTTTCAAGGGGTAAATTGGGCATTATTGAGATGCACGTCGCCACCATTTACTCCTCCACCTTTTAGTAGAGAGAAAATTGCATCGGATGAAAGCTGCACAGAAGCTCCAGTGGAGTATTATTAG 1356 50.66 MESSPDDIADDLQSLSFNSTNTNRSTSSGSETTLTASSSSLNIPSILSKPHAPSSDPCWSAVNRIRSESSFRQLAFSDLKFFHRLGSGDIGSVYLSGLKSAGTDGCLFAAKVMDKKELASRSKEGRARTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQPNKRFDELAVRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTATPQVINAKNPMNGTAPLKDYQIDAPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPTAAKDLISQLLIKDPSRRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFTPPPFSREKIASDESCTEAPVEYY 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27120999 27125428 + MELO3C021437.2.1 Cme11g01898 342561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01898 451 MobiDBLite consensus disorder prediction 9 36 - -
Cme11g01898 451 Pfam Protein kinase domain 309 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01898 451 Pfam Protein kinase domain 82 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01898 451 SUPERFAMILY Protein kinase-like (PK-like) 57 435 IPR011009 -
Cme11g01898 451 Gene3D Transferase(Phosphotransferase) domain 1 166 241 - -
Cme11g01898 451 Gene3D Phosphorylase Kinase; domain 1 78 165 - -
Cme11g01898 451 PANTHER FLIPPASE KINASE 1-RELATED 3 451 - -
Cme11g01898 451 PANTHER OS11G0150700 PROTEIN 3 451 - -
Cme11g01898 451 SMART serkin_6 79 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01898 451 ProSiteProfiles Protein kinase domain profile. 79 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme11g01898 451 Gene3D Transferase(Phosphotransferase) domain 1 308 430 - -
Cme11g01898 451 MobiDBLite consensus disorder prediction 1 36 - -
Cme11g01898 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g01220 Cme-Chr8:8594012 Cme11g01898 Cme-Chr11:27120999 8.13E-132 dispersed
Cme11g01898 Cme-Chr11:27120999 Cme12g00788 Cme-Chr12:14316880 6.52E-149 dispersed
Cme11g01897 Cme-Chr11:27108962 Cme11g01898 Cme-Chr11:27120999 5.39E-138 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65270 PF00069 Pkinase 3.20E-34 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01898 K08286 - csv:101207262 858.981