Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g01900 ATGAGCGGCGAAAGCCGACGGCGAGGCCGTGCCGAAAAGAGTAGTAGGTCGAAGAAGCAGAGGGTAATTCGGTCAGCTGAGGAGGAGATCGAATCGAAACTTGGATTTGATCTCTTCTCTGAAGGCGATAAAAGGCTTGGATGGTTGCTCACTTTCGCTTCTTCATCTTTGGAGGATCAGGATACTGGAAAGGTCTATAGTTGTATTGATCTTTATTTTGTGACACAGGATGGGAGCAGTTTCAAGTCAAAATATAAATTTCGTCCTTATTTCTATGCAGCCACAAAGGATAAAATGGAAACTGATGTGGAGGCATATTTGAGACGCCGTTATGAAGGTCGAATAGCTGATATTGAGATTTTAGAAAAAGAAGACCTTGATCTTAAGAATCATTTGTCAGGATTGCGCAAGGCATATTTGAAACTATCATTTGACACTGTTCAAGAATTGATGAACGTGAAGAGTGAACTATTGCATGTTGTTGAAAACAACTGGGCAAAGTCTGATGCTGCAGAAGCATACGATTCTATTTTATTTGGTAAAAGGGAACAAAAGCCACAAGATTTTCTAGAATGCATTATTGATCTTCGAGAGTATGACGTTCCTTACCATGTTCGCTTTGCTATTGATCATGATTTACGCTGTGGACAATGGTATGATGTTAGTGTTTCAAGTACTGGTGTTACATTGGAGAAGAGAAAAGATCTTCTGCAACGTGCCGAAGTTCACATATGTGCATTTGATATTGAAACCACAAAGCTACCATTGAAATTCCCAGATGCTGAATATGATATGATAATGATGATTTCCTATATGGTTGATGGAAATGGGTACTTGATTATCAATAGAGAGTGTGTTGGAGAAGATATTGAGAATTTGGAGTACACTCCAAAACCAGAATATGAAGGGTTCTTTAAAGTCACCAACGTAAAAAATGAGTTAGAGCTTCTCAAACTGTGGTTTTCCCATATGCGAGAGGTGAAACCTGGAATCTATGTCACTTATAATGGTGATTTTTTTGACTGGCCATTCATTGAAAGCAGAGCAGCTTATCATGGCTTTAAGATGAGTGATGAAGTAGGATTTCAATGTGACAAGAATCAGGGGGAATGCCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTTCCTGGGTAAAGCGTGATAGTTATCTACCCCAAGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCTAAATTGGGTTATGATCCTCTTGAAGTGAATCCCGAGGATATGGTGCGGTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCTGTTTCAGATGCTGTTGCTACATACTACTTGTACATGACCTACGTTCATCCTTTCATATTTTCTTTAGCAACCATTATTCCAATGTCACCAGATGAGGTGTTGCGCAAGGGAAGTGGGACACTTTGTGAAATGCTTCTAATGGTTCAGGCTTACAAGGCTAATGTCGTGTGTCCTAACAAACATCAATCAGATCCAGAGAAGTTCTACAGCAACCGGCTTCTTGAAAGTGAGACATACATTGGTGGTCACGTAGAATGCCTTGAGAGTGGTGTATTTAGATCTGATCTTCCTACCAGTTTTAGGCTTGATCCATCTGCATATGATCTATTGATAAACAATTTGGATAGAGATCTGCAATATGCCATACAAGTAGAAGGAAAGATGGACTTGGAGTCTGTATCAAATTATAGCGATGTGAAGAATGCTATCATGGAAAAGCTCATTAGATTGCGGGATGAGCCTGTACGCGAAGAGGGCCCTCTGATATATCACCTTGATGTGGCGGCGATGTATCCTAATATTATTTTAACAAATAGACTTCAGCCATCATCAATAGTCACAGATGAGGTTTGTACTGCATGCGATTTCAATCGTCCTGGGAAAACTTGCCTACGGAAACTTGAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAAAAAAGTGACTATTATCATCTGAAGAAGCAAATTGAGTCTGAGTTTGTTGATAGTGGCAATGTTCGGTTGTCAAAATCATTTCTTGAACTTCCGAAGTTGGAGCAGCAAGCAAAGCTCAAAGATCGTTTAAAGAAATACTGTCAGAAGGCTTATAAACGAGTACTTGATAAGCCGGTCACTGAAGTTCGAGAAGCAGGGATTTGCATGAGAGAAAACTCTTTCTATATCGACACTGTTCGTAGTTTTCGAGATAGAAGGTATGAATACAAAGGGCTCAATAAAGTATGGAAGGGAAAATTATCTGAAGCTAAATCAAGCGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTAGTTCTTTATGATTCTCTACAACTAGCTCATAAATGTATCCTCAACTCCTTTTATGGATATGTGATGCGAAAGGGCGCTCGATGGTATTCGATGGAAATGGCTGGGGTAGTTACATATACAGGAGCAAAAATCATTCAGAATGCTCGTCTGTTAATTGAGAAAATTGGAAAACCACTGGAGTTGGACACTGATGGTATCTGGTGTGCTCTACCTGGATCGTTCCCAGAGAATTTTACCTTCAAAACAAGAGATTCGAAGAAGTTGACAATTTCATATCCATGTGTTATGCTTAATGTTGATGTGGCAAGGAACAACACGAATGATCAATACCAGACGCTTATTGACCCTGTGAAGAAAACATATAAAACACACAGTGAATGCTCAATTGAATTTGAAGTAGATGGACCATATAAGGCAATGATCCTTCCCGCTTCCAAGGAAGAAGGCATTTTGATAAAGAAGAGATATGCTGTCTTCAATGATGATGGAACACTTGCGGAGCTAAAAGGCTTTGAGATCAAGCGTAGGGGGGAGTTAAAGCTCATCAAAGTTTTCCAGGCAGAACTTTTTGACAAGTTTCTTCATGGTTCCACATTAGAGGAATGCTATTCAGTTGTTGCATCTGTTGCAAATCGATGGCTTGATCTTCTAGATAATCAAGGAAAAGATATTGCAGATAGTGAGTTGCTTGATTATATATCTGAATCAAGTACCATGAGCAAGTCTTTGGTAGACTACGGGGAACAAAAGTCTTGTGCTGTTACCACTGCCAGACGTCTTGCAGATTTTCTTGGTGAAACAATGGTCAGGGACAAAGGCCTACGTTGTCAATACATAGTTGCATGTGAACCTAAGGGTACTCCTGTAAGTGAGCGTGCTGTTCCAGTGGCAATCTTTGAGACTGATGCAGAGATAATGAAATTTTATGTACGTAAATGGTGCAAAATTTCATCTGAAGTTGGCATCCGATCCATCATTGACTGGTCCTACTACAAGCAACGCTTAAGCTCAGCCATTCAAAAGATTATAACAATTCCAGCAGCCATGCAAAAGGTTGCAAATCCTGTTCCTAGGGTGGTCCATCCTGATTGGTTACATAAGAAAGTTCGAGAGAAGGATGATAAATTTCGCCAACAGAAAGTAGCTGATATGTTTGCATCCTCGAGCAGGGTTAAATATTCAAAGAAGAATAGTGATGTTAGCTGCAGCAAAAATGCTATGGATGAAGATAATTCTGAAGATTTAGAAGATTTTCAAAAGAAAACAAGTTCTACAAATGGCCCCAAACCAGTTGTCCGATGTTATGATGTCAAAGGCAAGAAACATTCACTTACGAGCGATGTTGAAATAAACTCAGAGATGCAGGATAATTTTAATGATGGAGGATTTGAGCCTTCTTCACCCTTGGATGTTGAAAACATAGACAAAAATGTAGATTACAGTGGATGGCTTGAAATTAAGAAGCGAAAATGGAAGGATACTTTAGACAGGAGGAAGAAGCAAAGGTTAGTAAGTTCAAGGACTCCGCTTGCTACTAATAACATTACAAGGGAGTTAAATGGTGCTACGAATAATAAAGATGGTCCTAGAACAGGAGTTGGTTCATATTTTAAGAGGCATGAAGGATCTGTAACTCGCTGCCATTGGCAGATTTTACAACTTGTTCATAGTTCACAGAGTGGCCAATATTTTGCTTGGGCTGTTGTCGAAGGAGTTATGCTAAAGATCCCTATTAATGTTCCTAGAGTTTTTTACCTTAATTCTAAAGTACCTATTACAGATGAATTTGTGGGCAGGCGTGTTAATAAAACTCTTCCCCATGGAAGGCACAGTTATAACTTGTATGAGGTTGTGACTGATGAGGGTCAATTTAGGACACAGAGGAATAAACTTGCAGCCCTACTTGCAGATCCAGAAGTAGAGGGAATCTATGAAAGCAAGGTACCATTAGAATTCAAGTCCATCTTTCAGATTGGCTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAGCGAAACATTCAAGACGGATGGAGTCTGGATGAACTGCAAATGAAGACTACAACAGAATGCAGTTATCTTGAAAAGTCAATCTCTTTCTTCTATGTGTATCATAGCATTTCTGAAGGAAGAGCTATCTTCATTACCTTTTTTCCCTCCACAAGATCAATATTTGTGGTGGTGGTTAATCCTTACCAGAACAAAGACTTGTCATCAACTTTTCTCGAAAGGCAATTTCGTGAAGCTTGTCAAATGCTGTCTGGTGAATCACAACCTCCTAAGAGTGGTATAACTTACAAGGTAGACTATGTTGTTAACATCAAAGAAGCTGAAGTGATTTTGCAAAGATCGATAGCAGAACACAGGAGCTTAAACCATGGACCTACTCTAGCTGTAATTCAATGCCCAAGTGTTCAACGGCTGAAGTCAGGTGTGAGAGTATTAGATGATTTTCCATGTGTGACCATCCCTTCTAATGCTCGTGATAACCAATATCAGGTTCTTGGTTGGCAACAAACAGCTGCAAAGATTGGAATGCAACGATGTGCTGCATCATCCCAATGGTTGAATGAGAGAATCTCTCTTGCAAGATATGCCCATGTACCATTAGGAAATTTTGGACTTGATTGGTTAATTTTTACAGCAGATATATTTTTTTCAAGAGCATTACATGATCAACAACAGGTACTTTGGATATCGGATGATGGTGTTCCAGACATAGGAGGCATTAACATAGAAGATGTGTGTTTTGCTGATGAGGTCCAACAACCTATTCTGACGTACCCTGGAGCATATAGAAAAGTTTCTGTGGAGTTTAAGATCCATCATTTGGCTGTCAATGCTCTGCTGAAGGGCAACCAAGTGAATGAAATGGAAGGAGGCAGTTTGTTTGGCTTTGAACATGATATGCAATGTGGGGCTCAATTTTCTAATGAAGAAAGTGGCTTTGATGAGGCTGCTTCATGTGCTCCAGCCTTCCGTGTCCTGAAACAATTGATACAGAGGTGTCTTACAGATGCAGTTACATCTGTGAATGTATATGCTGATGCAATTTTGAAGCATCTGTACAGATGGATTTGCAGCCCCCAATCAAAACTTCACGACCCAGCTCTTCATCGTTTGCTCCACAAGGTTATGCAAAAGGTGTTTGCTCTTTTGTTGTCTGAGCTACGCAAATTAGGTGCCACCATTATATTTGCAAACTTCTCAAGAATTATTATAGACACGGGAAGGTTTGATCTCTCTTCTGCCAAAGCATACTGTGACAGCTTGCTGAAAACAATGCAAACAAGGGATCTGTTCGAGTGGATTGAGCTGGAACCATTACAGTTTTGGCATTCCCTGTTGTTTATGGATCAGTATAACTATGGTGGAATCCGGGCAAACGATGATGAGAGAACAGATATTGAATCTCAAGTTGATATAGAGGCCAACTGGAACATTGCCGAGTATCTGCCCGAGAAGATTCAGGATCACTTTCTTTTTATCATCTCCCAGTTTTTGTATATGCCATGGAATTATGCAACCAAGCAAGCTGCAGCAAGAGCATCATTGCAGCGTGATGACACATGTACCCCATCCATTACTGTTTTAGCTGCTGAATCGTTTGAATTACACGTGACAGAACATCTGAAAGAAAAGCTAAGCTCTTACTTCAGTGACAAAATGTTGGGAATTGTTCGGGACATTGTTCTTCATATGAAAGGGAAGGAGAACACCCAGGATGTTTTGCCAGAACGACCTTCTGGTAATATCCACAAAGGAGATGCTGCTTTGGAATTTATTAAGCTCGTCTGCTCTGTTTTGGCTATTGATCAAAATGTCCATCATGATGTCCTGGTAATGAGGAAAAATTTACTGAAGTTTGTGCGTGTAAGAGAGTTTGCACCCGAAGCTGAGTTTTCTATTTCCAGCCCGTCCGTAGTCTTGCCCAACGTTATTTGCAGCTATTGCGAAGATTGTCGAGATCTGGACTTGTGCCGCGACTCAGCTTTACTAGCACAAGAATGGCGCTGTGCTGTGCCACAATGTGGACAACCATATGATCAAGAAGAGATGGAGAATGCGCTGCTTCAAATCGTGCGACAGAGGGAGCGTCTCTATCACATGCAGGATCTGGTATGCGTTCGTTGCAAACAAGTCAAAGCAGCTCATTTATTGGAACAATGTGGCTGTGCCGGTTCATTTAAATGCAAAGAAGATGCATCAGAATATTACAGCAAGATGCTGGTTCTTCTTAATGTAGCCAATCGTCAGAAGTTTCAACTACTGGAAGAGTTCACCACGTGGATCTTAGAAAACTCGAGCATTCCTGGAATTGAAACTCAAGGGAAGAAGGGATGA 6654 40.41 MSGESRRRGRAEKSSRSKKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFASSSLEDQDTGKVYSCIDLYFVTQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGRIADIEILEKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLHVVENNWAKSDAAEAYDSILFGKREQKPQDFLECIIDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPEYEGFFKVTNVKNELELLKLWFSHMREVKPGIYVTYNGDFFDWPFIESRAAYHGFKMSDEVGFQCDKNQGECRSKFACHLDCFSWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYSNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDLLINNLDRDLQYAIQVEGKMDLESVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPSSIVTDEVCTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGNVRLSKSFLELPKLEQQAKLKDRLKKYCQKAYKRVLDKPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKSSGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTRDSKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKTYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGEQKSCAVTTARRLADFLGETMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKDDKFRQQKVADMFASSSRVKYSKKNSDVSCSKNAMDEDNSEDLEDFQKKTSSTNGPKPVVRCYDVKGKKHSLTSDVEINSEMQDNFNDGGFEPSSPLDVENIDKNVDYSGWLEIKKRKWKDTLDRRKKQRLVSSRTPLATNNITRELNGATNNKDGPRTGVGSYFKRHEGSVTRCHWQILQLVHSSQSGQYFAWAVVEGVMLKIPINVPRVFYLNSKVPITDEFVGRRVNKTLPHGRHSYNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKVPLEFKSIFQIGCVCKVDKTAKKRNIQDGWSLDELQMKTTTECSYLEKSISFFYVYHSISEGRAIFITFFPSTRSIFVVVVNPYQNKDLSSTFLERQFREACQMLSGESQPPKSGITYKVDYVVNIKEAEVILQRSIAEHRSLNHGPTLAVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFGLDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAYRKVSVEFKIHHLAVNALLKGNQVNEMEGGSLFGFEHDMQCGAQFSNEESGFDEAASCAPAFRVLKQLIQRCLTDAVTSVNVYADAILKHLYRWICSPQSKLHDPALHRLLHKVMQKVFALLLSELRKLGATIIFANFSRIIIDTGRFDLSSAKAYCDSLLKTMQTRDLFEWIELEPLQFWHSLLFMDQYNYGGIRANDDERTDIESQVDIEANWNIAEYLPEKIQDHFLFIISQFLYMPWNYATKQAAARASLQRDDTCTPSITVLAAESFELHVTEHLKEKLSSYFSDKMLGIVRDIVLHMKGKENTQDVLPERPSGNIHKGDAALEFIKLVCSVLAIDQNVHHDVLVMRKNLLKFVRVREFAPEAEFSISSPSVVLPNVICSYCEDCRDLDLCRDSALLAQEWRCAVPQCGQPYDQEEMENALLQIVRQRERLYHMQDLVCVRCKQVKAAHLLEQCGCAGSFKCKEDASEYYSKMLVLLNVANRQKFQLLEEFTTWILENSSIPGIETQGKKG 2217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27128793 27163144 + MELO3C021434.2.1 Cme11g01900 342563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g01900 2217 MobiDBLite consensus disorder prediction 1173 1191 - -
Cme11g01900 2217 Gene3D DNA Polymerase, chain B, domain 1 56 234 - -
Cme11g01900 2217 Pfam DNA polymerase family B 760 1070 IPR006134 GO:0000166|GO:0003677
Cme11g01900 2217 SUPERFAMILY DNA/RNA polymerases 487 1115 IPR043502 -
Cme11g01900 2217 Pfam Domain of unknown function (DUF1744) 1524 1896 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Cme11g01900 2217 SMART polmehr3 240 843 IPR006172 GO:0000166|GO:0003676|GO:0003887
Cme11g01900 2217 Pfam DNA polymerase family B, exonuclease domain 75 401 IPR006133 -
Cme11g01900 2217 MobiDBLite consensus disorder prediction 1 24 - -
Cme11g01900 2217 Gene3D - 239 469 IPR036397 GO:0003676
Cme11g01900 2217 SUPERFAMILY Ribonuclease H-like 67 468 IPR012337 -
Cme11g01900 2217 Gene3D Palm domain of DNA polymerase 752 937 IPR023211 -
Cme11g01900 2217 MobiDBLite consensus disorder prediction 1171 1201 - -
Cme11g01900 2217 CDD DNA_polB_epsilon_exo 241 445 - -
Cme11g01900 2217 CDD POLBc_epsilon 504 1122 - -
Cme11g01900 2217 Gene3D - 941 1125 IPR042087 -
Cme11g01900 2217 SMART DUF1744_2 1511 1896 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Cme11g01900 2217 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 31 2202 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme09g00647 Cme-Chr9:6984608 Cme11g01900 Cme-Chr11:27128793 2.29E-34 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g01900 K02324 - csv:101208568 4312.68