Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01922 | ATGGCTGAAGAACATAGATGCCAAGCGCCGAAGCTTTGTGCGAACAACTGCGGATTTTTTGGCAGTCCCGCGACAAGAGATCTCTGTTCAAAATGTTACCGAGATCTGCAGTTAAAGGAACAGCAATCCTCCTCCGCTAAACTCGCCTTAAACCAAACCCTGGCGGCATCATCATCATCATCATCATCCTCGTTGTTGTTAAATCTGAAACCGGAAGCGAAGGAACAACGCGTGGAGGAGGAGGTGAGGACGGAAGTGGTTCGGACGGAAGCGGCGGAGGCAAGACAGCAACAGCAGCAGCAGCAGCCAAGCCGATGTATGACGTGCAGGCGGCGGGTGGGGTTGACGGGGTTCAAGTGCCGGTGTGGGATGGTGTATTGTGGGAGTCACCGGTACCCGGAACAACACGGGTGTGAATTTGACTTCAAGCAGATGGGGAAGGATCAGATCGCGAAGGCGAATCCGGTGGTGAAAGGGGAGAAACTGCAGAAGATTTGA | 498 | 53.41 | MAEEHRCQAPKLCANNCGFFGSPATRDLCSKCYRDLQLKEQQSSSAKLALNQTLAASSSSSSSSLLLNLKPEAKEQRVEEEVRTEVVRTEAAEARQQQQQQQPSRCMTCRRRVGLTGFKCRCGMVYCGSHRYPEQHGCEFDFKQMGKDQIAKANPVVKGEKLQKI | 165 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27311260 | 27312336 | - | MELO3C021416.2.1 | Cme11g01922 | 342585 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01922 | 165 | Pfam | A20-like zinc finger | 12 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Cme11g01922 | 165 | ProSiteProfiles | Zinc finger AN1-type profile. | 100 | 146 | IPR000058 | GO:0008270 | |
Cme11g01922 | 165 | SMART | AN1_Zf_4 | 106 | 143 | IPR000058 | GO:0008270 | |
Cme11g01922 | 165 | SMART | A20_3 | 10 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
Cme11g01922 | 165 | PANTHER | ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 | 1 | 165 | - | - | |
Cme11g01922 | 165 | Gene3D | - | 1 | 65 | - | - | |
Cme11g01922 | 165 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 12 | 54 | - | - | |
Cme11g01922 | 165 | ProSiteProfiles | Zinc finger A20-type profile. | 7 | 41 | IPR002653 | GO:0003677|GO:0008270 | |
Cme11g01922 | 165 | Gene3D | - | 79 | 161 | IPR035896 | - | |
Cme11g01922 | 165 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 1 | 165 | - | - | |
Cme11g01922 | 165 | Pfam | AN1-like Zinc finger | 106 | 142 | IPR000058 | GO:0008270 | |
Cme11g01922 | 165 | SUPERFAMILY | AN1-like Zinc finger | 86 | 160 | IPR035896 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme08g01206 | Cme-Chr8:8505068 | Cme11g01922 | Cme-Chr11:27311260 | 4.82E-56 | dispersed | |
Cme09g01680 | Cme-Chr9:21512622 | Cme11g01922 | Cme-Chr11:27311260 | 4.54E-41 | dispersed | |
Cme11g01922 | Cme-Chr11:27311260 | Cme01g02485 | Cme-Chr1:32943566 | 8.61E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01922 | - | - | csv:101219115 | 258.07 |