Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g01934 | ATGGAAATGGATCGCGATTTGACTGTTCGATTATCTGCTCTGTGGAACGTCATTTGTCTAAAGAAAAGCTTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTTTGTTCTTAGGGTCCGTTGGAGCTGCCCATAACAAAGATCAACTGAAGAAATTGAATATCACGCACATTTTAACCATTGCTTGTTCATTGCCTCCTGCTGATCCAAACGATTTTGTTTGTAAAGTAGTATGTGTCTTGGACACTAGAGAGGCAGATATTAAACAGCACTTTGACGATTGTTTCAACTTTATCGATGAGGGAAGACGATCTGGTGGAGTCTTGGTTCATTGCTTTGCTGGAATATCCCGAAGTGTAACAATTACAGTTGCTTACCTGATGAAAAAGCTAGGCATGAACCTAACACAAGCATTGGAACACGTCAAGAGTAGACGACCACAAGCAGCTCCAAACATTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCTCTTCAAGCTAGCAGAGTTGATGAAATGCAACTGTCAAATGTTTAA | 543 | 40.52 | MEMDRDLTVRLSALWNVICLKKSFKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTIACSLPPADPNDFVCKVVCVLDTREADIKQHFDDCFNFIDEGRRSGGVLVHCFAGISRSVTITVAYLMKKLGMNLTQALEHVKSRRPQAAPNIGFMVQLKDFETALQASRVDEMQLSNV | 180 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27371643 | 27374270 | + | MELO3C021405.2.1 | Cme11g01934 | 342597 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g01934 | 180 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 30 | 169 | IPR029021 | - | |
Cme11g01934 | 180 | CDD | DSP | 30 | 162 | - | - | |
Cme11g01934 | 180 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B | 15 | 169 | - | - | |
Cme11g01934 | 180 | SMART | dsp_5 | 29 | 166 | IPR020422 | GO:0006470|GO:0008138 | |
Cme11g01934 | 180 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE | 15 | 169 | - | - | |
Cme11g01934 | 180 | Pfam | Dual specificity phosphatase, catalytic domain | 37 | 165 | IPR000340 | GO:0008138|GO:0016311 | |
Cme11g01934 | 180 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 91 | 148 | IPR000387 | GO:0016311|GO:0016791 | |
Cme11g01934 | 180 | Gene3D | Protein tyrosine phosphatase superfamily | 23 | 177 | IPR029021 | - | |
Cme11g01934 | 180 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 29 | 169 | IPR020422 | GO:0006470|GO:0008138 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme10g00858 | Cme-Chr10:5788233 | Cme11g01934 | Cme-Chr11:27371643 | 9.39E-20 | dispersed | |
Cme10g01211 | Cme-Chr10:12400395 | Cme11g01934 | Cme-Chr11:27371643 | 1.96E-06 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g01934 | - | - | csv:101211942 | 330.102 |