Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02077 ATGGCATTTTGGTGGACTGTGCTTGTTCTTGGATTTGCTTACGCGATCTGTAGGTTGCTCTTGATGCTTATCCCTCCCAACGTGCCTTCAATTGAAGTTGACGCATCTGACGTTATGGACGACGGGAATCAAACGCAGGAGAATAGCTACATCTACATTCCACCTAGGATAAAGACGCAACAGCAGGACAAGAGAGTCCAGTGTTACGAGCCTGCAACTATGAAATACCTTGGCTATTTTCCTGCATTGTCACGAGACGAGGTCAAGGAGCGTGTTGCTTCAGCCAGGAAAGCGCAGAAAGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATACTTTTGAAGTACATAATTGAACATCAAGAGCTCATTTGCGAGATCTCCTCCCGTGACACTGGAAAAACAATAGTCGATGCTAATATGGGAGAAGTAATGGCGACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGAAGGGCAACACTTCACAAGAAAGCCCGAGTAGAATTTCACCCCCTTGGAGTTATTGGGGCGATAGTCCCATGGAACTATCCGTTCCATAACCTTTTAAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTGGTTAAGGTTTCAGAACATGCAAGTTGGTCAGGATGCTTTTATGTTAGGATTATCCAAGCTGCACTTGCTGCCGTTGGAGCTCCTGAGAGTTTGGTTGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCGCTAGTATCTTCAGTAGACAAAATGATATTCGTTGGATCAACTGGTGTGGGTAGGATGATAATGAAAAGTGCTGCTGACACACTTATTCCAGTTACTCTTGAGTTGGGTGGAAAGGATGCATTTATCGTGTGTGAGGATGTATATGATTTGGATCATGTTGTAAACGTTGCTCTCCGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGGACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTGAAGGCTATTACAGTTGGTCCACCGTCAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAATCTGAGAAACTTCAAAGCCTTGTAAATGATGCCTTAGACAGGGGGGCAAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTCCCACCTACCGTTATTGTTGACGTCAACCATAAAATGAAGTTAATGCAAGAGGAGGCATTTGGACCTATCCTGCCTATAATGAAATTCAGCACAGATGGTGAGGCCGTGAAGCTTGCAAATGACTCGAGATTTGGACTTGGATTAGCTGTCTTTTCTCGCCATCCAGAACGTGCGAAGTTCATTGCTTCTCAGATTCATACGGGAAGTGTTGCAATCAACGACTTCGCTACAAATTATTTGTGCCAGTCCTTGCCATTTGGTGGCGTAAAAGAGAGTGGATTCGGTCGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTTGTCAAAGCAGTAGTTGAGGATAGGTGGTGGCCGTTCGTTCAGACCAAGCACCCTAAGCTTCTTACGTATCCTGTTGCAGACAACGCTTTTGAGTTTCAAATGTCACTTGTTGAAGCGACATACGGGCTGAACATATGGGATCGGTTAAGAGCATTGGTCAATGTTCTGAAGATGTTGTCGGAGCATAACGCTCTGACTCAAAACAATCCTAGCAATGGTAATGGACGTAAGAGAGATGAATGA 1815 44.46 MAFWWTVLVLGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRIKTQQQDKRVQCYEPATMKYLGYFPALSRDEVKERVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRDTGKTIVDANMGEVMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNLLNPVLAAVFAGNGIVVKVSEHASWSGCFYVRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKSAADTLIPVTLELGGKDAFIVCEDVYDLDHVVNVALRASITSSGHNCTGAERFYVHKDIYSSFVDKISERVKAITVGPPSAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHKMKLMQEEAFGPILPIMKFSTDGEAVKLANDSRFGLGLAVFSRHPERAKFIASQIHTGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPFVQTKHPKLLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEHNALTQNNPSNGNGRKRDE 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28446761 28454845 - MELO3C021272.2.1 Cme11g02077 342740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02077 604 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 301 494 IPR016163 GO:0016620
Cme11g02077 604 CDD ALDH_F15-22 69 532 - -
Cme11g02077 604 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 525 IPR016162 GO:0016491
Cme11g02077 604 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 563 - -
Cme11g02077 604 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Cme11g02077 604 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 563 - -
Cme11g02077 604 SUPERFAMILY ALDH-like 50 530 IPR016161 GO:0016491
Cme11g02077 604 Pfam Aldehyde dehydrogenase family 61 528 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01699 Cme-Chr7:22544320 Cme11g02077 Cme-Chr11:28446761 4.14E-41 dispersed
Cme11g01643 Cme-Chr11:24293435 Cme11g02077 Cme-Chr11:28446761 4.23E-55 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02077 - - cmo:103497791 1210.67