Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02086 CACCTTCTCCTTCTCCTTCTTCTTCTTCCCCACAAGAGAATTGAGGCGAAGACCTTTTGTTCCTCTACAACCCAACACACTAATTTTCATCTTCTTAATTTTTCTAGGGTTTCATTTCTTTTTTTGTCTTCATTTCTTCGTCCCCATCATCATCAAACCTTCCTAGGGTTCTTACTTACTTGGGTGGAGGGGGTTTTCATCTCTCAGAGATGTGGGATGCTCCGGGGATTCATGAATCTGCTCTCTCTTTGTTGGAAGCCTTTTGGGCATCCTACTGATAATTTCACCTCTGTTGGTGTTATTGGGACCAATTGTGGTGCCAAAGACACCAAAGACACCTTACTTTGGTTCTATGATTATGGTCATTATGCTTCCGGTGATTTCTCCATGGCTGTTGTTCAAGCCAACCAAGTCCTTGAAGACCAGAGCCAAATTGAATCTGGCCCTTTTGGTACTTTCCTCGGTATCTACGATGGTCATGGCGGCCCTGACGCTGCTCGTTATGTTTGTGATAATTTGTTTAGACGTTTCCAAGAAGAACATCAGGGAGTTGTGACTCGTGAAACCATTCTGAACGCTTTCCGTCGAACAGAAGAAGGGTTCACGGCTGTTGTGTCAGAGTTATGGAGTACTCGACCCCAGATAGCAACAGTTGGGACGTGCTGTCTAGTAGGGGTTATACACGAGCAGACACTCTACATTGCGAGCCTGGGGGACTCTCGTGCTGTGTTAGGGAAGAAAGTTGGCAACACCGGTGAGATTGCTGCCATTCAATTATCAACTGAGCATAATGCAAATCTTGAGGAAATCAGGCAAGAGTTAAGCGTGATGCATCCAAATGATCCGCAAATTGTGGTTCAAAGACATGGAGTTTGGAGAGTGAAAGGAATTATACAGGTTTCTAGATCCATTGGGGATGTCTATTTGAAGCATGCTCAGTATAATAATGAAAGAATCAATGCTAAATTTAGGCTTCCTGAGCCAATTGATATGCCTATATTGACTGCTGTACCTACAATTATTGCTCACCCTCTTCATCAAAACGATTCTTTTCTCATATTTGCATCCGATGGACTTTGGGAACACCTAACCAATGAAAAAGCAGTGGATATTGTTCATAATCATCCACGTGCAGGAAGTGCAAAAAGGCTTGTGAAGGCAGCCCTTCAAGAAGCAGCTCGAAAACGAGAAATGCGGTATTCAGATCTCCGAAAGATTGACAAGAAGGTTCGGCGTCATTTTCACGATGACATTAGTGTTATCGTTTTATTTTTCAACCACGATCTTATATCCAGAAACAATGTCCTCCTAGATCAACCATTATCAGTAAGAAGTGCTTATGATCATTGA 1350 42.89 HLLLLLLLLPHKRIEAKTFCSSTTQHTNFHLLNFSRVSFLFLSSFLRPHHHQTFLGFLLTWVEGVFISQRCGMLRGFMNLLSLCWKPFGHPTDNFTSVGVIGTNCGAKDTKDTLLWFYDYGHYASGDFSMAVVQANQVLEDQSQIESGPFGTFLGIYDGHGGPDAARYVCDNLFRRFQEEHQGVVTRETILNAFRRTEEGFTAVVSELWSTRPQIATVGTCCLVGVIHEQTLYIASLGDSRAVLGKKVGNTGEIAAIQLSTEHNANLEEIRQELSVMHPNDPQIVVQRHGVWRVKGIIQVSRSIGDVYLKHAQYNNERINAKFRLPEPIDMPILTAVPTIIAHPLHQNDSFLIFASDGLWEHLTNEKAVDIVHNHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFFNHDLISRNNVLLDQPLSVRSAYDH 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28515753 28519850 + MELO3C021263.2.1 Cme11g02086 342749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02086 449 ProSiteProfiles PPM-type phosphatase domain profile. 127 425 IPR001932 -
Cme11g02086 449 SUPERFAMILY PP2C-like 136 426 IPR036457 -
Cme11g02086 449 Gene3D - 120 435 IPR036457 -
Cme11g02086 449 ProSitePatterns PPM-type phosphatase domain signature. 153 161 IPR000222 GO:0043169
Cme11g02086 449 CDD PP2Cc 128 425 IPR001932 -
Cme11g02086 449 SMART PP2C_4 119 423 IPR001932 -
Cme11g02086 449 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 76 449 - -
Cme11g02086 449 PANTHER ALPHABET, ISOFORM E-RELATED 76 449 - -
Cme11g02086 449 Pfam Protein phosphatase 2C 152 395 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g02086 Cme-Chr11:28515753 Cme11g00367 Cme-Chr11:3727600 2.99E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02086 K01102 - csv:101207284 756.518