Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02089 ATGGCGTCATCTGTTCTTTCGAACTCCGATCGTGCACGGGAGTCTTCTTCGAGGAAGCAAAAGAAGAAGAAAAGCCATGGCAATAGAGATCATCATCAAAGCCAGAATCATCATATTAAATGGAAATCTCAAGCTCAACAGGAAATTTACTCATCCAAGCTAGTGCGAGCATTGAATCAAGTCAGACTCAGTCCTTCAAACGAGGCGCCGCCACGCCGCGGCAGAGCCGTACGTGAAGCCGCCGATAGAGTCCTTGCCGTTGCCGCCAAGGGGAGAACTAGATGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTGAAGTTTAGGAAGGCGCCAAGGAGACAGAGATCAACATCCAGCGCTGGAAACAACCGCTCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAGAGGGAAATCCTTGCCGGCGGTACAAAGGAAAGTTAGGGTCCTTGGTCGGCTGGTTCCCGGTTGCCGGAAAGAACCATTGCCGGTTATTCTGGAAGAAGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGGGCCATGAGTGCCCTTGCTGAGTTGCTCTCGGCTTCAACTTCTGCTGCAGGCTCTAGTTCATCTCCTCCAAGCTGA 621 50.56 MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQSQNHHIKWKSQAQQEIYSSKLVRALNQVRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPRRQRSTSSAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSSPPS 206
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 28535881 28537330 + MELO3C021260.2.1 Cme11g02089 342752
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02089 206 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 16 205 - -
Cme11g02089 206 MobiDBLite consensus disorder prediction 1 46 - -
Cme11g02089 206 MobiDBLite consensus disorder prediction 109 132 - -
Cme11g02089 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 195 IPR036638 GO:0046983
Cme11g02089 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 205 IPR044660 GO:0006355
Cme11g02089 206 MobiDBLite consensus disorder prediction 17 38 - -
Cme11g02089 206 CDD bHLH_AtIBH1_like 133 188 IPR044549 GO:0006355
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00030 Cme-Chr2:294326 Cme11g02089 Cme-Chr11:28535881 1.70E-49 dispersed
Cme05g01448 Cme-Chr5:23898586 Cme11g02089 Cme-Chr11:28535881 9.47E-06 dispersed
Cme05g01536 Cme-Chr5:24744123 Cme11g02089 Cme-Chr11:28535881 4.14E-41 dispersed
Cme11g02089 Cme-Chr11:28535881 Cme06g00797 Cme-Chr6:5290006 3.35E-74 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02089 - - csv:101220618 334.339