Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02091 ATGGCCAAGTATCTGTTTTTCCACCTTTCTCTAGTCATGTTTAGCTTCACTGCAATCGCTTTGGCAAACATGCAAGCTTCGTATGGAGGAGACGAAAACCTGCCAACATTCGGCACACCCCCTATATGCCCGGAGGCAGAAGCCATCGTCTTCTCCTGGGTCCAAACTGCCATCTCCGAGGACCCCCGGATGGCGGCATCTCTGCTTCGGCTCCACTTCCACGACTGCTTTGGATGTGATGCCTCTGTCTTGCTGGATGATAACGAGAATTTTGTAGGTGAAAAGACAGCAGCTCCAAATGTGAACTCACTTAGGGGATTTGAAGTGATTGATGCTATAAAATCTGAGATGGAATCTGTTTGCCCACAAACAGTTTCATGCGCTGACATTCTAGCCCTTGCAGCTAGGGACTCTGTTGGACTATCAGGAGGACCCTTTTGGAAAGTGGAATTTGGAAGAGGGGATAGCATAAGTGCTAGCAAATCAGCAGCACAAAACAACATTCCGGGCCCAAACTCCACTGTAGCTACCTTAGTTTCTAAGTTCCAGAACCTTGGCCTTTCTCTAAGAGATATGGTCGCCCTCTCAGGGGGACACACACTGGGAAAAGCTAGATGTGCTTCATTCAGTTCTAGGCTACAAGCGAATGGAGGCAGCCCCAATGAAGGAGCAAACCAAGAGTTTATAGAGTCATTGAAACAGCTCTGCTCGGCACCCGGTAGTAGCTCAACACTGGCACAGCTCGACGTTGTAACCCCGGCTACATTTGACAACCAGTACTACATTAATCTTCTCTCTGGAGAGGGGTTACTCCAGTCTGATCATGTCCTTGTGACTGAGCATTACCAAACAAGAGAGATAGTCGAAACCTACGCCATCGACCCAGTTGCCTTCTTTGAAGATTTCAAGCAGTCAATGGTGAAGATGGGAAGCCTCAAACCACCTGCTGGAACACAGACCGTGATCCGAACTAATTGTCGAACTGTTAGCTAG 993 48.34 MAKYLFFHLSLVMFSFTAIALANMQASYGGDENLPTFGTPPICPEAEAIVFSWVQTAISEDPRMAASLLRLHFHDCFGCDASVLLDDNENFVGEKTAAPNVNSLRGFEVIDAIKSEMESVCPQTVSCADILALAARDSVGLSGGPFWKVEFGRGDSISASKSAAQNNIPGPNSTVATLVSKFQNLGLSLRDMVALSGGHTLGKARCASFSSRLQANGGSPNEGANQEFIESLKQLCSAPGSSSTLAQLDVVTPATFDNQYYINLLSGEGLLQSDHVLVTEHYQTREIVETYAIDPVAFFEDFKQSMVKMGSLKPPAGTQTVIRTNCRTVS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28567048 28569396 + MELO3C021259.2.1 Cme11g02091 342754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02091 330 CDD secretory_peroxidase 43 329 IPR033905 GO:0004601|GO:0042744
Cme11g02091 330 Gene3D - 43 329 - -
Cme11g02091 330 Pfam Peroxidase 54 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 ProSiteProfiles Plant heme peroxidase family profile. 43 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 SUPERFAMILY Heme-dependent peroxidases 42 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PANTHER PEROXIDASE 72-RELATED 23 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02091 330 PANTHER PEROXIDASE 40 23 329 - -
Cme11g02091 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cme11g02091 330 Gene3D Peroxidase, domain 2 169 310 - -
Cme11g02091 330 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g02091 Cme-Chr11:28567048 Cme07g01686 Cme-Chr7:22396550 9.71E-102 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02091 K00430 - csv:101205763 622.468