Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g02177 | ATGGCTTCCCTTCATAGAAAGCAAGCTTATCATGCTTGCTTTCTTATTATTCTTTTCCTCTTTTTCTCTCTCCCATCTTTATATGTCTCTATCTCAGAAGTTGAAGCCTCATATCTTACTCGTCGTCAATTATTGACTCTAAAACAACATGATGAACTCCCCAATGACTTCAAATACAAACTTGACATTGCCGACACTTTTCCAAATGAGAGGTTGAAGATGGCTTATGTAGCCCTTCAAGCATGGAAATTAGCTATTTATTCCGACCCACAAAACATGACTGCCAATTGGGTTGGCGCCGATGTTTGTTCTTACACTGGCGTCTTCTGTGCTCCGGCGCTTGATAACCCAAACATTGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTACTTGCCTCCGGAACTTGGGCTTTTGACCGACTTGGCTCTCTTCCATATTAACTCTAACCGATTTTGTGGGATCATTCCTTCTAGCTTCTCCAAGCTTGTACTCATGTTTGAGTTTGATGTCAGTAACAACCGCTTCGTTGGCCATTTTCCTCTCGTTGTCCTCGAATGGCCAAGTGCGAAGTACCTCGATCTCAGGTACAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACTAAGGAGTTCGACGCCATCTTCCTAAATAACAACAGATTCAATTCTCTAATCCCTGAAACCATTGGAAATTCCACCGTCTCTGTTGTCTCCTTTGCCAACAACGAATTTCACGGCTGCATTCCTAGCACCATTGGTCAAATGTCTAACCTTAATCAAATTCTCTTCCTTGGCAACAAGCTCGGCGGCTGTTTTCCACCTGAGATCGGAAACCTTGTCAATCTCACAGTCTTCGACATTAGCAGCAATGGTTTCACAGGTCAATTGCCAGAATCCTTGTCTGGCCTCCAAAATTTGGAGATTTTGGACGTTAGCAACAATGAATTGAGGGGTTCTATCTCTGCAGGCCTTTGCAAGTTACCTAAATTGGCTAACTTCACTTTCTCCTTCAATTACTTTGATAGGCAAGATACGACGTGTGTTGCATCTAAAGGATCAAAGAAGGTCTTTAATGATGGTCAAAATTGTTTGGCAAATCGACCAGTGCAAAAAGATGCAAACAAATGTAGCACTGTCTTGAAGAAATCAGTGGAATGTGGCAATTGTGGTGGTGGGTCGAGTTCTCCTGGTGTGCCGTCGACTCCTGAGGATCCATATGATCAGTCTCCATCACCAAGATATAGATCTCCACCACCTCCAGAGGTCACCCCACCATCTCCAAGTGAGACCTCTGTTCCATCGTCACCACCCTCTCCAGTTGAGTCTTCACCACCAACCTCAACTCCATCCTCATCACCTACCATTGAAACACCTACTTCATCTCCAGCTGAATCTCCCCTACCACCACCATCACCAATCTATTCCTCTCCACCGCCACCACCTATCCACTCTCCTCCACCCCCTGTTCACTCACCACCACCACCGGTCTCCTCTCCTCCACCTCCTGTTCACTCACCACCACCACCAGTTTCCTCTCCTCCACCACCGATTCACTCTCCACCTCCACCAGTTCACTCCCCACCTCCACCGGTTCACTCCCCTCCTCCACCGATTCACTCCCCACCTCCACCTATTCACTCTCCACCACCCCCCGTCTACTCTCCTCCCCCACCAGTTCATTCCCCACCACCGCCTGTCTACTCTCCACCCCCACCAGTCTATTCCCCACCACCGCCTGTCTACTCTCCACCCCCACCAGTCTACTCTCCTCCACCACCAGTCCTCTCTCCACCTCCACCCATCTACTCTCCACCACCACCACCTGTTTACTCCCCACCGCCACCTGTTCAATCTCCACCACCTCCGACTGCATCTCCTCCTCCTCCCTCTTCCAATTCTTCACCACCACCATCATTTGAAGACGTGATCCTCCCACCAAATATCGGCTTCCAATATACATCACCGCCTCCACCAATGTTCCCCGGTTATTGA | 2010 | 48.41 | MASLHRKQAYHACFLIILFLFFSLPSLYVSISEVEASYLTRRQLLTLKQHDELPNDFKYKLDIADTFPNERLKMAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGVFCAPALDNPNIEVVAGIDLNHGDIAGYLPPELGLLTDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPLVVLEWPSAKYLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFNSLIPETIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFLGNKLGGCFPPEIGNLVNLTVFDISSNGFTGQLPESLSGLQNLEILDVSNNELRGSISAGLCKLPKLANFTFSFNYFDRQDTTCVASKGSKKVFNDGQNCLANRPVQKDANKCSTVLKKSVECGNCGGGSSSPGVPSTPEDPYDQSPSPRYRSPPPPEVTPPSPSETSVPSSPPSPVESSPPTSTPSSSPTIETPTSSPAESPLPPPSPIYSSPPPPPIHSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPIHSPPPPVHSPPPPVHSPPPPIHSPPPPIHSPPPPVYSPPPPVHSPPPPVYSPPPPVYSPPPPVYSPPPPVYSPPPPVLSPPPPIYSPPPPPVYSPPPPVQSPPPPTASPPPPSSNSSPPPSFEDVILPPNIGFQYTSPPPPMFPGY | 669 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29123538 | 29130783 | - | MELO3C021193.2.1 | Cme11g02177 | 342840 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g02177 | 669 | MobiDBLite | consensus disorder prediction | 468 | 574 | - | - | |
Cme11g02177 | 669 | MobiDBLite | consensus disorder prediction | 612 | 648 | - | - | |
Cme11g02177 | 669 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 11 | 570 | - | - | |
Cme11g02177 | 669 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 | 560 | 664 | - | - | |
Cme11g02177 | 669 | Pfam | Leucine Rich Repeat | 311 | 333 | IPR001611 | GO:0005515 | |
Cme11g02177 | 669 | MobiDBLite | consensus disorder prediction | 393 | 574 | - | - | |
Cme11g02177 | 669 | MobiDBLite | consensus disorder prediction | 394 | 408 | - | - | |
Cme11g02177 | 669 | MobiDBLite | consensus disorder prediction | 409 | 452 | - | - | |
Cme11g02177 | 669 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 11 | 570 | - | - | |
Cme11g02177 | 669 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 560 | 664 | - | - | |
Cme11g02177 | 669 | MobiDBLite | consensus disorder prediction | 612 | 669 | - | - | |
Cme11g02177 | 669 | Gene3D | Ribonuclease Inhibitor | 238 | 360 | IPR032675 | - | |
Cme11g02177 | 669 | MobiDBLite | consensus disorder prediction | 453 | 467 | - | - | |
Cme11g02177 | 669 | SUPERFAMILY | L domain-like | 85 | 350 | - | - | |
Cme11g02177 | 669 | PRINTS | Pistil-specific extensin-like signature | 446 | 469 | IPR003882 | - | |
Cme11g02177 | 669 | PRINTS | Pistil-specific extensin-like signature | 481 | 499 | IPR003882 | - | |
Cme11g02177 | 669 | Gene3D | Ribonuclease Inhibitor | 75 | 237 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g02177 | Cme-Chr11:29123538 | Cme11g02179 | Cme-Chr11:29128849 | 0 | dispersed | |
Cme11g02177 | Cme-Chr11:29123538 | Cme11g02178 | Cme-Chr11:29123538 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g02177 | - | - | csv:101221370 | 742.651 |