Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g02179 | CTTATTATTCTTTTCCTCTTTTTCTCTCTCCCATCTTTATATGTCTCTATCTCAGAAGTTGAAGCCTCATATCTTACTCGTCGTCAATTATTGACTCTAAAACAACATGATGAACTCCCCAATGACTTCAAATACAAACTTGACATTGCCGACACTTTTCCAAATGAGAGGTTGAAGATGGCTTATGTAGCCCTTCAAGCATGGAAATTAGCTATTTATTCCGACCCACAAAACATGACTGCCAATTGGGTTGGCGCCGATGTTTGTTCTTACACTGGCGTCTTCTGTGCTCCGGCGCTTGATAACCCAAACATTGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTACTTGCCTCCGGAACTTGGGCTTTTGACCGACTTGGCTCTCTTCCATATTAACTCTAACCGATTTTGTGGGATCATTCCTTCTAGCTTCTCCAAGCTTGTACTCATGTTTGAGTTTGATGTCAGTAACAACCGCTTCGTTGGCCATTTTCCTCTCGTTGTCCTCGAATGGCCAAGTGCGAAGTACCTCGATCTCAGGTACAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACTAAGGAGTTCGACGCCATCTTCCTAAATAACAACAGATTCAATTCTCTAATCCCTGAAACCATTGGAAATTCCACCGTCTCTGTTGTCTCCTTTGCCAACAACGAATTTCACGGCTGCATTCCTAGCACCATTGGTCAAATGTCTAACCTTAATCAAATTCTCTTCCTTGGCAACAAGCTCGGCGGCTGTTTTCCACCTGAGATCGGAAACCTTGTCAATCTCACAGTCTTCGACATTAGCAGCAATGGTTTCACAGGTCAATTGCCAGAATCCTTGTCTGGCCTCCAAAATTTGGAGATTTTGGACGTTAGCAACAATGAATTGAGGGGTTCTATCTCTGCAGGCCTTTGCAAGTTACCTAAATTGGCTAACTTCACTTTCTCCTTCAATTACTTTGATAGGCAAGATACGACGTGTGTTGCATCTAAAGGATCAAAGAAGGTCTTTAATGATGGTCAAAATTGTTTGGCAAATCGACCAGTGCAAAAAGATGCAAACAAATGTAGCACTGTCTTGAAGAAATCAGTAGAATGTGGCAATTGTGGTGGTGGGTCAAGTTCTCCCGGTGTGCCGTCGACTCCTGAGGATCCATATGATCAGTCTCCATCACCAAGATACAGATCTCCACCACCTCCGGTAGTCACTCCACCATCTCCAAGTGAGACCTCTGTTCCATCACCACCACCAGTCTCCTCTCCTCCACCTCCTGTTCATTCACCACCACCCCCAGTCCACTCCCCACCTCCACCGGTTCACTCCCCACCTCCACCGGTTCACTCTCCACCTCCACCGGTTCACTCCCCACCTCCACCGGTTTACTCCCCACCACCTCCACCGGTCCACTCCCCACCACCTCCCATCCACTCCCCACCCCCACCAGTCCACTCCCCACCCCCACCGTCTATTCTCCGCCTCCACCTGTCTACTCCCCTCCACCACCAGTTCAATCTCCACCACCTCCGACTGCATCTCCTCCTCCTCTTGACTCTTCACCACCACCATCATTTGAAGATGTGA | 1617 | 47.68 | LIILFLFFSLPSLYVSISEVEASYLTRRQLLTLKQHDELPNDFKYKLDIADTFPNERLKMAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGVFCAPALDNPNIEVVAGIDLNHGDIAGYLPPELGLLTDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPLVVLEWPSAKYLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFNSLIPETIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFLGNKLGGCFPPEIGNLVNLTVFDISSNGFTGQLPESLSGLQNLEILDVSNNELRGSISAGLCKLPKLANFTFSFNYFDRQDTTCVASKGSKKVFNDGQNCLANRPVQKDANKCSTVLKKSVECGNCGGGSSSPGVPSTPEDPYDQSPSPRYRSPPPPVVTPPSPSETSVPSPPPVSSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPVHSPPPPIHSPPPPVHSPPPPSILRLHLSTPLHHQFNLHHLRLHLLLLLTLHHHHHLKM | 538 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29128849 | 29130741 | - | MELO3C021194.2.1 | Cme11g02179 | 342842 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g02179 | 538 | MobiDBLite | consensus disorder prediction | 379 | 498 | - | - | |
Cme11g02179 | 538 | MobiDBLite | consensus disorder prediction | 395 | 498 | - | - | |
Cme11g02179 | 538 | SUPERFAMILY | L domain-like | 71 | 336 | - | - | |
Cme11g02179 | 538 | Gene3D | Ribonuclease Inhibitor | 225 | 347 | IPR032675 | - | |
Cme11g02179 | 538 | Pfam | Leucine rich repeat N-terminal domain | 64 | 96 | IPR013210 | - | |
Cme11g02179 | 538 | Gene3D | Ribonuclease Inhibitor | 61 | 224 | IPR032675 | - | |
Cme11g02179 | 538 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 | 3 | 500 | - | - | |
Cme11g02179 | 538 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 3 | 500 | - | - | |
Cme11g02179 | 538 | MobiDBLite | consensus disorder prediction | 380 | 394 | - | - | |
Cme11g02179 | 538 | PRINTS | Proline rich extensin signature | 384 | 405 | - | - | |
Cme11g02179 | 538 | PRINTS | Proline rich extensin signature | 432 | 449 | - | - | |
Cme11g02179 | 538 | PRINTS | Proline rich extensin signature | 450 | 475 | - | - | |
Cme11g02179 | 538 | PRINTS | Proline rich extensin signature | 412 | 428 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g02177 | Cme-Chr11:29123538 | Cme11g02179 | Cme-Chr11:29128849 | 0 | dispersed | |
Cme11g02179 | Cme-Chr11:29128849 | Cme05g01968 | Cme-Chr5:28235872 | 5.86E-130 | dispersed | |
Cme11g02178 | Cme-Chr11:29123538 | Cme11g02179 | Cme-Chr11:29128849 | 0 | tandem | |
Cme11g02179 | Cme-Chr11:29128849 | Cme11g02180 | Cme-Chr11:29136990 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g02179 | - | - | csv:101221370 | 721.465 |