Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02256 ATGACATTGAATAGCCAAATTGAAAGCCTATGGATTTTCGCTTTGGCTTCAAAATGCTCCTCTCTCACCAAACACAATTTCCTTTTCTCTTCACTCCTTCTCCTCCTTATTTCCTTTCTCCTCTCCATTTTCTATTGGGCCCATCCCGGCGGCCCAGCTTGGGGCCGCCGCCGCAGCCGCCGCTCCACCGCGGTCATCCCTGGCCCAAGAGGCTTCCCCGTCATCGGTAGTATGAACTTGATGACGGGTCTGGCCCACCAGAAAATCGCCTCCGTAGCCAAATCCTTACAAGCTACTCGTCTCATGGCTTTTTCCCTCGCCAACACTCGAGTGATTGTCACGTGCCATCCCGACATAGCCAAAGACATCCTCAATAGCTCCGTCTTTGCCGACCGTCCGATCAAAGAATCGGCCTACTCCTTGATGTTCAATCGTGCCATTGGATTCGCTCCTTACGGCGTTTATTGGCGAACCCTCCGTCGGATTGCTTCCCACCATCTCTTCTCTCCTAAACAAATCAAATCCTCCGAATCACAACGCCGTCAAATCGCTTCCCAATTGGTCAAAATTCTCTCGTCAACTGCCACGTCATCCCCCCATCATCGCATTCGTCAAACTCTTAAAACCGCTTCTTTGAATAACATGATGGGTTCGGTTTTTGGCCGGTTTTATAATCTCTCTGACTCTAATCCTGAAGTTCTGCTACTTCAGAGCCTTGTGGACGAAGGGTATGATTTATTAGGCCTTCTTAATTGGTCCGACCATCTCCCTTTTCTGCGTGATTTCGACCCACAAAATATCCGGTTTAGGTGCTCCCGTTTGGTTCCCAAAGTGAACAACTTCGTCACCCGGATCATCGACGAACATCGTCAAAATTCAAACCGAGAAACTACGGATTTCGTCGATGTTCTTCTCTCTCTTCAACAAAACGAAAATCTCTCTGACTCCGATATCATCTCCGTTCTTTGGGAAATGATATTTAGAGGAACGGACACAGTGGCGGTTCTAATCGAGTGGATTCTAGGGAGGATGGTTGTTCATAAAGATGTGCAAGAGAAAGTACAAGAGGAATTAGATAACGTGGTTGGAAAATCGCGTGCCGTTATGGAATCCGACATTCCGTCGTTGGTTTACTTAACGGCCGTAGTTAAGGAAGTTCTGAGGTTGCATCCACCAGGCCCACTTCTCTCTTGGGCTCGTATTGCTATTACCGATACAACCATTGATGGGTATCACGTGCCACGTGGGACAACTGCTATGGTTAACATGTGGTCGATAGCCCGGGACCCACAGATCTGGTCGGACCCACTTCAATTTAAGCCGGAGAGGTTTCTGTCTGGTGCTGGTGCTGGTGGTGGTGACGTCGAGTTCTCGATCATGGGTTCCGATCTCCGACTAGCTCCGTTCGGGTCGGGTCGTAGAACTTGCCCTGGAAAGGCACTTGCTTGGACAACTGTCTCTTTCTGGGTGGCTACACTTTTACATGAATTTAAATGGTTGCCTTCTCCAAACCAAAACGAGGCTGTCAACTTTGATGAAGTTCTCAAGTTGTCTTGTGAGATGGCAAATCCACTCACGGTTAAACTATCCCCAAGACGTACTTAA 1605 48.47 MTLNSQIESLWIFALASKCSSLTKHNFLFSSLLLLLISFLLSIFYWAHPGGPAWGRRRSRRSTAVIPGPRGFPVIGSMNLMTGLAHQKIASVAKSLQATRLMAFSLANTRVIVTCHPDIAKDILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIASHHLFSPKQIKSSESQRRQIASQLVKILSSTATSSPHHRIRQTLKTASLNNMMGSVFGRFYNLSDSNPEVLLLQSLVDEGYDLLGLLNWSDHLPFLRDFDPQNIRFRCSRLVPKVNNFVTRIIDEHRQNSNRETTDFVDVLLSLQQNENLSDSDIISVLWEMIFRGTDTVAVLIEWILGRMVVHKDVQEKVQEELDNVVGKSRAVMESDIPSLVYLTAVVKEVLRLHPPGPLLSWARIAITDTTIDGYHVPRGTTAMVNMWSIARDPQIWSDPLQFKPERFLSGAGAGGGDVEFSIMGSDLRLAPFGSGRRTCPGKALAWTTVSFWVATLLHEFKWLPSPNQNEAVNFDEVLKLSCEMANPLTVKLSPRRT 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 29665912 29667797 - MELO3C022246.2.1 Cme11g02256 342919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02256 534 Gene3D Cytochrome P450 53 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 Pfam Cytochrome P450 67 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PANTHER CYTOCHROME P450 78A7-RELATED 4 534 - -
Cme11g02256 534 PANTHER CYTOCHROME P450 78A6 4 534 - -
Cme11g02256 534 SUPERFAMILY Cytochrome P450 66 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Cme11g02256 534 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS E-class P450 group I signature 422 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02256 534 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00196 Cme-Chr11:2349690 Cme11g02256 Cme-Chr11:29665912 2.37E-164 dispersed
Cme11g02256 Cme-Chr11:29665912 Cme12g01927 Cme-Chr12:25293372 5.99E-171 dispersed
Cme11g02256 Cme-Chr11:29665912 Cme03g01458 Cme-Chr3:23861080 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02256 K20619 - csv:101216159 986.867