Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g02263 | ATGGGGAAGAAAGGAGGTAGCTCATGGTTGACTGCTGTCAAAAGGGCTTTCAGATCTCCCACTAAAGATGACGACGAAAAGAGGAGAGACAAACGTCGATGGATTTTTAGAAAACCAACTAATCAGCAGCCGGAGCCACTCGCTGCCCACCAGCCGCCGTCTAAGCCGGCACCGGCTCTACCCATTGATTCTGTAGCTTTAGAAGACCAGAAACATGCGCTTGCAGTGGCTGAAGCTGCCATGGTTGCTGCTAGAGCGGCTGCACAAGCTGTCCACCTTACCCGACCTGCTCGGCCTGGGTTGGATCGACATAGTCTCGCCGCCATTGTGATTCAAACGGCCTTTAGAGGATATCTGGCAAGGAGGGCTCTGCGGGCATTGAAGGGGTTAGTGAAGTTGCAAGCATTAGTGAGAGGACACAATGTGAGGAAGCAAGCAAAGACAACACTGCAATGTATGAAAGCATTAGTGAGAGTACAGGAAAAAGTGCTGGATCACCGGATGCGACTCTCCCTCGAGGGCAGCCGACGGTCGACCTTTAGTGACACCAACAGCGTCTACGAATCTCGCTATCCTCAAGACGTGTCTGAAAGGAAGACTATTAAGTGTGTGTCAAGAGAAGGAAGCAGCATTACGGAGGATTGGGATGAACGTGCTCACACAGTTGAAGAAGTTAAGGCAATGTTACAACTTAGAAGAGATGCTGCTTTGAATCGTGACAACATTTTATCTCATTCCTTTTCTCAGCAGATATGGAGGACTGGAAAGAGCCCATCAATAGGAAATCAAACAGAGCTTGAAGAAGGACAAAAATGGTTAGACCAATGGATGGCAAAGAAGCCATGGGAGAGCAGGGCAAGAGCTTCCACAGATCACAGACCACAGCCCCTTAAAACCCTTGAAATCGACACCTCTCGACCCTACTCCTACTTATCTCCCAACAATCTCCACACAACAAATTATCAACCTCAATCCCAAAGATCGAACTCGCTTTCATCCTCCTCCCCACTCCACAGAGCCCATCAACACCAATTCTCCATCACCCCATCCCCGTCAAAATCACGACCGGTCCCTCAAGTTCGGTCGGCGAGTCCTCGCTACAGCAGAGAAGATAGAAATCAAATCAACCATCACCAAATTACATCCCAAACACCAAGCTTGAGGTCAAAATATCAATATCAAAAAGGGGGTAGTGGTGGAGGGACTTCAATGCCAAATTACATGGCAGCAACAGAGTCAGCCAAGGCACGAGTGCGGTCACAAAGTGCACCAAGGCAAAGGCCAGCAACGCCCGAGAGGGAACGAGTTGGTGGGACTGCAAGGAAACGGCTATCGTTTCCAGTACCGCCGGATCCTTATGGTAGAATAGCAGGGTGTTCTGTTTATGGGAATAGCATGAAGAGTCCAAGTTTTAAGAGTGCTTGTGGAAGGTTTGGTGGGTTAGAGGAACAGTCAAATTATTCTTCTTGCTATACAGAAAGCCATGGAGGAGAGGTTTCTCCATCTTCAACCACTGATCTTAGAAGGTGGCTGAGATGA | 1539 | 48.73 | MGKKGGSSWLTAVKRAFRSPTKDDDEKRRDKRRWIFRKPTNQQPEPLAAHQPPSKPAPALPIDSVALEDQKHALAVAEAAMVAARAAAQAVHLTRPARPGLDRHSLAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKTTLQCMKALVRVQEKVLDHRMRLSLEGSRRSTFSDTNSVYESRYPQDVSERKTIKCVSREGSSITEDWDERAHTVEEVKAMLQLRRDAALNRDNILSHSFSQQIWRTGKSPSIGNQTELEEGQKWLDQWMAKKPWESRARASTDHRPQPLKTLEIDTSRPYSYLSPNNLHTTNYQPQSQRSNSLSSSSPLHRAHQHQFSITPSPSKSRPVPQVRSASPRYSREDRNQINHHQITSQTPSLRSKYQYQKGGSGGGTSMPNYMAATESAKARVRSQSAPRQRPATPERERVGGTARKRLSFPVPPDPYGRIAGCSVYGNSMKSPSFKSACGRFGGLEEQSNYSSCYTESHGGEVSPSSTTDLRRWLR | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 29739482 | 29743091 | - | MELO3C022253.2.1 | Cme11g02263 | 342926 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g02263 | 512 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 512 | - | - | |
Cme11g02263 | 512 | MobiDBLite | consensus disorder prediction | 377 | 427 | - | - | |
Cme11g02263 | 512 | Pfam | Protein of unknown function (DUF4005) | 364 | 458 | IPR025064 | - | |
Cme11g02263 | 512 | PANTHER | PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 | 1 | 512 | - | - | |
Cme11g02263 | 512 | MobiDBLite | consensus disorder prediction | 486 | 512 | - | - | |
Cme11g02263 | 512 | ProSiteProfiles | IQ motif profile. | 128 | 155 | IPR000048 | GO:0005515 | |
Cme11g02263 | 512 | Pfam | IQ calmodulin-binding motif | 131 | 147 | IPR000048 | GO:0005515 | |
Cme11g02263 | 512 | Pfam | IQ calmodulin-binding motif | 107 | 125 | IPR000048 | GO:0005515 | |
Cme11g02263 | 512 | Gene3D | - | 101 | 157 | - | - | |
Cme11g02263 | 512 | MobiDBLite | consensus disorder prediction | 283 | 449 | - | - | |
Cme11g02263 | 512 | SMART | iq_5 | 103 | 125 | IPR000048 | GO:0005515 | |
Cme11g02263 | 512 | SMART | iq_5 | 126 | 147 | IPR000048 | GO:0005515 | |
Cme11g02263 | 512 | MobiDBLite | consensus disorder prediction | 283 | 299 | - | - | |
Cme11g02263 | 512 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 89 | 149 | IPR027417 | - | |
Cme11g02263 | 512 | ProSiteProfiles | IQ motif profile. | 104 | 132 | IPR000048 | GO:0005515 | |
Cme11g02263 | 512 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Cme11g02263 | 512 | MobiDBLite | consensus disorder prediction | 17 | 38 | - | - | |
Cme11g02263 | 512 | MobiDBLite | consensus disorder prediction | 305 | 361 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g00023 | Cme-Chr6:155118 | Cme11g02263 | Cme-Chr11:29739482 | 2.67E-121 | dispersed | |
Cme06g00579 | Cme-Chr6:3718771 | Cme11g02263 | Cme-Chr11:29739482 | 4.67E-20 | dispersed | |
Cme09g01169 | Cme-Chr9:16427891 | Cme11g02263 | Cme-Chr11:29739482 | 1.01E-33 | dispersed | |
Cme11g02263 | Cme-Chr11:29739482 | Cme11g02434 | Cme-Chr11:31128618 | 9.61E-25 | dispersed | |
Cme12g01757 | Cme-Chr12:24242848 | Cme11g02263 | Cme-Chr11:29739482 | 9.84E-18 | dispersed | |
Cme11g02263 | Cme-Chr11:29739482 | Cme10g00057 | Cme-Chr10:431699 | 2.95E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g02263 | - | - | csv:101207978 | 944.11 |