Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02386 ATGGAAACCAACGCCTATTTTCCATTTCTGATCACTCTCTTGGCTTTAATCTCCATTTTCTTCATACGAAAATCCAAAACCAAAACCAAAAGAAACAATCTCCCTCCCTCTCCTCTACCTCTCCCAATCCTTGGCCATCTTCATCTCCTCAAACACCCAATCCACCGAACACTCCACACTCTCTCCCAAAAATATGGCCCAATCTTCACTCTCCGACTCGGCTCCCGCCTCGTCGTCGTTGTTTCCTCCACGTCCGCCGCCGAAGAATGCTTCACAACAAACGACATCGTTTTCGCCAACCGCCCCGAGTTCGTTTCTGGCAAGTATCTCACCTATGGAAACTCCACACTCGGGGCTGCCCCATACGGCGACCACTGGCGTAATCTAAGACGGTTGAGCGCAACCGAAGTGTTGTCAACCATACGATTGAACATGTCAGCGAGAATACGAAAAGAAGAGATCAGTATTCTGATAAAGAAATTGAACAGAGTTTCGAGTACGGATTTTGGGAAAGTGAAGTTGAAATCGTTGTTTTCGGAATTGACGTTCAATATGATAATGACAATGGTGGCGGGGAAAAGGTATTATGGGGAAGAAGTGAGTGAGTTGGAAGAAGCTAAGAAGTTTAGGGAAATTATGGAGAGGGCGTTTCAATTGGGTTCATATCCTGGGGATTTTTTGCCATTTTTGAAATGGGTTGATTGGCAATATACAAAAAGAGTTGAAAGTCTTGGGAAAGATACGGATTGGTTTTTGCAGAATTTGGTGGATGAACATCGGAGTAATGAAGAAGAAGGGGAAAAGGGAAATACAATGGTCAGTCATCTCCTCCGTTTGCAGAAGACTCAACCTGATTATTATACTGATGAAATTATCAAAGGCCTCATTGTTACAATTCTATCAGCAGCAACAGAAACATCATCGGTGACAATAGAGTGGGCAATGTCCAATCTCCTCAACCATCCAGAAGCATTAAAAAAGGTAAAGGAAGAACTCGACACACAAATTGGACAAGATCGTATTCTAGATGAAGAAGATATCTCCAATCTACCATACCTCCAGAATGTAATTTCAGAGACACTACGCCTTTATCCACCAGCTCCACTCTTAGCTCCTCATTTATCATCAAGCAGTTGTTCTTTAGGAGGATACCATATTCCTGCTGACACTATCTTAATGGTGAATGCATGGGCCATCCAAAGGGATCCTAAGGTTTGGGAGGACTCGACGAGCTTTAAGCCCGAGAGGTTCGAGAGTGATCAGGTTCGAGAAGGTAGCAACAACAACAATGGTTATAGATTCTTGCCATTTGGATTGGGTAGGAGGGCTTGCCCTGGGATGGGCATGGCTAATCGTGTGGTGGGGTTGACTTTGGGTTCATTGATACAAAGCTTTGAGTGGAAGAGGGTAAGTGAAAAGGAAATTGATATGACTGAAGGTCAAGGAATTTCTATGCCTAAAGTTGAGCCATTGGAGGCCTTGTGTAGAGCTCGTCCCATCATCAAAAAGCTTGCATTGGACATTTGA 1527 43.94 METNAYFPFLITLLALISIFFIRKSKTKTKRNNLPPSPLPLPILGHLHLLKHPIHRTLHTLSQKYGPIFTLRLGSRLVVVVSSTSAAEECFTTNDIVFANRPEFVSGKYLTYGNSTLGAAPYGDHWRNLRRLSATEVLSTIRLNMSARIRKEEISILIKKLNRVSSTDFGKVKLKSLFSELTFNMIMTMVAGKRYYGEEVSELEEAKKFREIMERAFQLGSYPGDFLPFLKWVDWQYTKRVESLGKDTDWFLQNLVDEHRSNEEEGEKGNTMVSHLLRLQKTQPDYYTDEIIKGLIVTILSAATETSSVTIEWAMSNLLNHPEALKKVKEELDTQIGQDRILDEEDISNLPYLQNVISETLRLYPPAPLLAPHLSSSSCSLGGYHIPADTILMVNAWAIQRDPKVWEDSTSFKPERFESDQVREGSNNNNGYRFLPFGLGRRACPGMGMANRVVGLTLGSLIQSFEWKRVSEKEIDMTEGQGISMPKVEPLEALCRARPIIKKLALDI 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30784704 30786714 + MELO3C022375.2.1 Cme11g02386 343049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02386 508 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Cme11g02386 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 Gene3D Cytochrome P450 20 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02386 508 PANTHER CYTOCHROME P450 10 504 - -
Cme11g02386 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 504 - -
Cme11g02386 508 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00735 Cme-Chr11:8990660 Cme11g02386 Cme-Chr11:30784704 8.40E-173 dispersed
Cme11g00747 Cme-Chr11:9237535 Cme11g02386 Cme-Chr11:30784704 2.46E-179 dispersed
Cme11g00751 Cme-Chr11:9301858 Cme11g02386 Cme-Chr11:30784704 5.06E-173 dispersed
Cme11g02386 Cme-Chr11:30784704 Cme11g02388 Cme-Chr11:30791134 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02386 K13260 K25488 csv:101207828 857.825