Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02387 ATGGATAATGGTTTGGTAATAGCTCTCATTGCTGCCCTTCCCATCTGTGCAATCTTTCACTTAATTTTGAGCTATATTTCCCATCGCAACAAACAAAAACTTCCACCTGGTCCTCTTTCTCTGCCGTTTATAGGCAATCCCATTTGGCTTTTCAAGCCTCTTTCTGAACTTGAAACCATCCTTCGTCATTACCATTCCAAATATGGCCCAGTTGTAACCCTTCACTTTGGTAACACCCCTTCCATTTTCATAGCTAGCCACTCTGTTTCTCACCATGCTTTGGTCCAAAACGGCGCCATCTTTGCTGACCGTTTCCCCGTCATGGAAACAGCCAAAATCATTACTAGTAATCAGCATAATATTAGCACTGCCTTCTATGGTCCTACATGGCGTGCCCTCCGCCGTAACCTCACGTATGAGCTTCTCCATCCGTCTCGTTTGAAAGCTCATTCGGTTTCACGTAAATGGACGTTGGATGTTCTGGTTCATCGCCTCCGCCAAACATCGGCTGCTGAGCCTGTGAAGGTCATGGATCATATTCGTTATGCAATGTATTGTTTAGCTACAGTTATGTGTTTTGGGGAGAGGTTTGATGAGAAGTTTATTAATGAAGTACGAGAATCTCAACGTGGGATTTTGTTGAATATCAATAAATTCAATGATCTTAATTTCTGGCCAGTAAGATTGGGGAAGATTTTGTTCAAGAAACGATGGGCTGAGATTCGTCAGCTACGTAAACGGCAAGACGATTTGTTGTTACCTTTGATTAACAAAGCAAGAAAGAACAGAACAACAATCAAAGATAATGAAGAAACTGGGAAACCAATCCCTTATGTTGATACTTTATTTGATTTAGAAATTGCGGATAACAATGATGAGAAGAAAAAGAGGAAATTAGTAGACGATGAACTCATAACATTATGTTCTGAGTTTCTCGACGCGATAACCGATACAACGGCTGCGTCGTTGCAATGGATAATGGCAAATCTAGTGAAGTATCCAGAGATACAGGAGAAGTTGTACAAGGAGATAAAAGAAGTGATGGGAAACAAGAAGCAGGGTGAAGAAATAGAAGAGGAAGATTTGGGGAAGATGACATATTTGAAAGCAGTAGTAATGGAGGGACTAAGAAGGCATCCCCCGGGGCATATGTTATTGCCACATAAGGTGACAGAGGACAGTGTTTTGGAAGGAGGATACAGGGTGCCGAAAGGAACATCGGTGAACTTTATGGTAGCGGATATGGGTTGGGATGAGAAAGTATGGCCGGAACCGATGGCGTTCAAGCCGGAGAGATTCTTGAACGATAAAGTAGAGGGAGGGGTTGAGTTGGAAGTTGATGTAACGGGGAGTAAGGAAATAAAGATGATGCCATTTGGGGCAGGGAGGAGGATATGTCCTGGACTTGGATTGGGGTTATTGCATTTGGAGTATTTTGTTGGGAATTTAATGTGGAATTTCAAGTGGAAGGCTGTTGGGGAAGTTGATCTGTCTGAGAAGCAAGAGTCTGCTATCATTATGAAATATCCATTGCTTGCTTACTTGTCGCCAAGAAGCTAA 1560 42.44 MDNGLVIALIAALPICAIFHLILSYISHRNKQKLPPGPLSLPFIGNPIWLFKPLSELETILRHYHSKYGPVVTLHFGNTPSIFIASHSVSHHALVQNGAIFADRFPVMETAKIITSNQHNISTAFYGPTWRALRRNLTYELLHPSRLKAHSVSRKWTLDVLVHRLRQTSAAEPVKVMDHIRYAMYCLATVMCFGERFDEKFINEVRESQRGILLNINKFNDLNFWPVRLGKILFKKRWAEIRQLRKRQDDLLLPLINKARKNRTTIKDNEETGKPIPYVDTLFDLEIADNNDEKKKRKLVDDELITLCSEFLDAITDTTAASLQWIMANLVKYPEIQEKLYKEIKEVMGNKKQGEEIEEEDLGKMTYLKAVVMEGLRRHPPGHMLLPHKVTEDSVLEGGYRVPKGTSVNFMVADMGWDEKVWPEPMAFKPERFLNDKVEGGVELEVDVTGSKEIKMMPFGAGRRICPGLGLGLLHLEYFVGNLMWNFKWKAVGEVDLSEKQESAIIMKYPLLAYLSPRS 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30788094 30789844 - MELO3C022376.2.1 Cme11g02387 343050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02387 519 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 Pfam Cytochrome P450 35 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 SUPERFAMILY Cytochrome P450 35 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Cme11g02387 519 Gene3D Cytochrome P450 26 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02387 519 PANTHER CYTOCHROME P450 8 517 - -
Cme11g02387 519 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 517 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g00594 Cme-Chr11:6661802 Cme11g02387 Cme-Chr11:30788094 1.12E-169 dispersed
Cme11g00596 Cme-Chr11:6674340 Cme11g02387 Cme-Chr11:30788094 0 dispersed
Cme11g00644 Cme-Chr11:7445825 Cme11g02387 Cme-Chr11:30788094 5.28E-152 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02387 K24184 - csv:101204774 959.903