Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02388 ATGGAAGACTCTATCTTACAATATTCAGCCTTTTCAATTCTGAGTATTGGTGTAGTAGTTTTGGCAATCATAAAGTATCTGTTGAAGTTCAATTCCAACAAAAATCTACCTCCAAGTCCACCCTCTATTCCAATTATAGGTCACCTCCATCTTCTTAAACTTCCAGTTCATAGAACTCTACAAACTCTCTCACAAAAGTATGGTCCAGTACTTTCACTTCGATTCGGTTCTCGTTTGGTCGTCGTCGTTACATCACTCGAAGCAGCCGAAGAATGCTTCACAAAAAACGATGTCATTTTCGCAAACCGTCCCAACTTCGCCGTGAGTCATTGCTTGAGTTACAATGAAACCACTCTTGGAGCGGCTCCATATGGGGATCACTGGCGTAAACTTCGACGTGTGAGCACACTTGAAATACTGTGTTCAAGTCGTCTCAATGCGAATTACGAGATTAGGAGAGACGAAGTGAGAAGGGCAGTGAAGAAGATCTTTGAAGTTTCAAGAGATGGATTTGGGAAAGTGGAGTTTAAACCATTGGTGAAGGAATTGACGATGAATATAACAATGAGAATGGTTGCAGGGAAGAGATATTACGGTGAAGAAGCAGCTAAAAGTAGTGAAGCAAGAACATTTCAAGCTATTGTTCATGAGCTTTTTGAATTTACTTTGTCTTCATATCCAGCTGACTTCTTGCCAATTTTGAAGTATATTGATATTCAAGGTTTTATGAAGAGGGCAAAGAAGCTTATTGCAAGGGTTGATGCATTTTGGCAAGGATTGATTGATGAACATAGAAGAGGTGAAATTAGTAATGAAGAAATGAAGAATTGTATGGTTGCTCATTTTCTTAAGTTGCAAGAGACTCAGCCTGATTATTACACAGATGATATTATCAAAGGCTTGATTTTGACAATGATACTCGGTGGCTCAGACACTACTGCTGTGACAATAGAGTGGGCAATGTCAAATCTACTAAACCATCCATCAGTACTAAAGAAGGCAAGAGCTGAAATAGAATCTCAACTTGATGGAGATAAATTGCTTGAAGAAACCGATCTTTCAAAATTAAGCTACCTACGATGTATAGTCCTAGAAACTCTTCGGTTGTACCCAGCTGGCCCGCTCCTACTGCCACATAAGTCTTCAGCTGATTGTAGTATATCAGGATACAACATACCACGTGACACAATATTACTAGTAAACGCATGGGCTATCCATAGAGACCCGACATTGTGGGAAGATCCAACAAGTTTTAGACCAGAGAGGTTTGAGAATAATAATGGGGAAGGTGATGCAAATAACAAGTTAATGATAGCATTTGGTTTGGGAAGGAGAGCTTGTCCAGGAACTGGAATGGCACATAGAGTGATGGGTTTGATGCTTGGAACATTGATTCAATGTTTTGATTGGAAGAGTATTGATGGTAAGGAAGTAGATATGAATGAAGGAAAGGGGGTTAGTATGCCTAAAGCTCAACCACTTGAAGCACTATGTAAAGCAAGAGAAATTGCAACCAAGCTGCTTTGA 1527 39.69 MEDSILQYSAFSILSIGVVVLAIIKYLLKFNSNKNLPPSPPSIPIIGHLHLLKLPVHRTLQTLSQKYGPVLSLRFGSRLVVVVTSLEAAEECFTKNDVIFANRPNFAVSHCLSYNETTLGAAPYGDHWRKLRRVSTLEILCSSRLNANYEIRRDEVRRAVKKIFEVSRDGFGKVEFKPLVKELTMNITMRMVAGKRYYGEEAAKSSEARTFQAIVHELFEFTLSSYPADFLPILKYIDIQGFMKRAKKLIARVDAFWQGLIDEHRRGEISNEEMKNCMVAHFLKLQETQPDYYTDDIIKGLILTMILGGSDTTAVTIEWAMSNLLNHPSVLKKARAEIESQLDGDKLLEETDLSKLSYLRCIVLETLRLYPAGPLLLPHKSSADCSISGYNIPRDTILLVNAWAIHRDPTLWEDPTSFRPERFENNNGEGDANNKLMIAFGLGRRACPGTGMAHRVMGLMLGTLIQCFDWKSIDGKEVDMNEGKGVSMPKAQPLEALCKAREIATKLL 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30791134 30793190 + MELO3C022377.2.1 Cme11g02388 343051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02388 508 Pfam Cytochrome P450 37 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 SUPERFAMILY Cytochrome P450 37 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme11g02388 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cme11g02388 508 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 13 503 - -
Cme11g02388 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00313 Cme-Chr7:1996164 Cme11g02388 Cme-Chr11:30791134 1.14E-123 dispersed
Cme11g02386 Cme-Chr11:30784704 Cme11g02388 Cme-Chr11:30791134 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02388 K13260 K25487 csv:101208069 966.066