Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02415 ATGGCTTCTGCTACTGGTCTTGTAGTTGGATCTCATGTTTGGTTGGAGGATTCTGAGGAAGCTTGGATAGAGGGCGAGGTTCTAGAAATTCGTGGTGAAGAAATTAAGGTCCAATGCACCTCGGGGAAAACGGTTGCAGTTAAAGCAGCTAATGTCTATCCCAAAGATTCTGAAGTGCCACCCTGTGGGGTGGATGACATGACCAAGTTGGCTTACTTGCACGAACCAGGGGTGCTACACAACTTAAAATTGAGATATGATATCAATGAAATATATACTTATACAGGGAACATATTGATTGCTGTAAACCCTTTTACAAAGTTACCCCATCTCTATGATAGCTATATGATGGCACAATATAAAGGGGCCGCATTTGGTGAGCTTAGTCCACATCCATTTGCAGTTGCTGATGCTGCCTACAGGCATTCTTCCGACAGTACTTCTGTAAATTTACTTATGGTCAATGAGAAAAAGAGTCAATCCATATTGGTTAGTGGTGAAAGTGGGGCTGGAAAGACAGAAAGTACGAAGTTGCTTATGCGTTATCTTGCATATATGGGAGGGAGAGCTGCTTCTGAGGGGAGGTCTGTTGAGCAACAAGTTCTGGAGTCAAATCCTGTTTTAGAAGCATTTGGGAATGCAAAAACTGTTCGAAACAACAACTCAAGTCGTTTTGGTAAGTTTGTGGAGATCCAATTTGACCAAGGGGGAAGAATATCAGGAGCTGCTATCAGAACTTACTTGCTGGAAAGATCTCGTGTTTGTCAGGTGTCTGATCCAGAGAGAAACTATCATTGCTTCTACATGCTTTGTGCTGCACCACCTGAGGAGGTGAAGAAGTATAAGTTGGGAAACTCAAAAGATTTCCATTATCTAAATCAATCAAACTGCCATGCTTTGGATGGAATTGATGATGCCAAAGAATATCTTGCAACAAGAAAAGCAATGGAAGTTGTTGGGATAAGTTCAGAAGAGCAGGACGGAATATTTCGTGTTGTGGCTGCCATTCTTCATCTTGGAAACATTGAATTTGCTAAAGGGAAGGAGGCTGATTCTTCCGTTCCCAAAGATGAAAAATCTTGGTTCCATCTTAGAACTGCTGCGGAGCTTTTCATGTGTGATGAAAAGGCGTTGGAAGATTCTCTCTGCAAACGTGTGATCGTCACTCGTGATGAAACTATCACAAAGTGGCTGGATCCAAATTCTGCAGCCCTTAGCAGAGATGCTTTAGCAAAGATTGTATACTCAAGGTTATTCGACTGGCTGGTGGACAAAATTAATAATTCAATTGGCCAGGATCCTGATTCAAAGTTCTTGATTGGAGTTCTGGATATCTATGGATTTGAGAGTTTCAAGACAAACAGTTTCGAGCAATTCTGCATCAACTTGACTAATGAAAAGCTTCAGCAGCATTTCAATCAGCATGTTTTCAAGATGGAGCAAGAAGAGTATACAAAAGAAGAAATTGATTGGAGCTATATTGATTTTGTTGATAATCAAGACGTCCTTGATCTCATTGAAAAGAAACCTGGTGGTATTATTGCCCTTCTGGATGAAGCATGTATGTTCCCCAGATCAACTCATGAAACATTTGCTCAAAAGTTGTATCAGACATTCAAAAATCATAAACGCTTCAGCAAGCCAAAATTAGCCCGGAGTGACTTCACAATTGCTCATTATGCTGGTGATGTCACCTATCAGACTGATTTATTTCTGGACAAAAATAAAGATTATGTTGTTGCTGAACACCAAGCACTCTTGAGTGCTTCCAAGTGCTCCTTCGTGTCATGTTTGTTTCCTCCATTAGCTGAAGAATCATCCAAATCTTCAAAGTTCTCATCAATAGGTTCTCGTTTCAAGCTACAATTGGTATCACTGCTGGAAACTCTAAGTGCTACTGAGCCCCATTACATTCGATGTGTAAAGCCCAATAATCTTCTAAAGCCTGCTATCTTTGAGAATAAGAATATATTGCAACAATTACGATGTGGGGGAGTCATGGAGGCGATTAGGATAAGTTGTGCTGGTTTTCCAACAAGGAAAACTTTTGACGAATTTGTTGACCGTTTTGGACTCCTTGCACCCGAAGTTTTGGATGGGAGTTCTGACGAAGTCGCTGCTTGCAAGAGGCTTATAGAGAAGGTTGGACTTAAGGGATACCAGATTGGTAAGACAAAGGTGTTTCTTAGAGCTGGTCAGATGGCTGAGCTTGATGCGCTCAGAACTGAGATCTTAGGGCGATCAGCAAGTATTATTCAGCGGAAGGTTCGTTCTTATCTGGCCCGTAGAAGTTTTGTATTGCTTCGGAGGTCGGCTATACGTCTGCAGTCTGCTTGTAGAGGACAACTTGCTCGAGAAGTATTTGAGGGTTTGAGGAGAGAAGCTTCTTCTTTAATGATTCAAAGGAATTTGCGCATGCATCTCTGCAGGAAAGCTTACAAAGAAAAATACTCTTCAGCTGTTTCTATTCAAACTGGAATGCGTGGAATGGCTGCTCGCGATGAGCTACGGTTCAGAAGGCGGTCTAAAGCAGCAATTATTATCCAGAGCTACTGTCGCAGATATTTGGCTCAGCTGCACTATAAGAAGTTAAAGAAAGCAGCAATCACCACTCAATCCGCGTGGAGAGGAAGAGTTGCTCGTAAGGAACTACGAAAGCTGAAAATGGCTGCAAGGGAAACAGGAGCTCTTCAAGCTGCAAAAAATAAATTGGAAAAGCAAGTCGAAGAATTAACATGGAGACTGCAGTTGGAGAAGCGCATGAGGGCTGACTTGGAAGAAGCTAAAACACAAGAAAATGAGAAGCTGCAATCTGCATTGCAAGATATGCAGTCTCAGTTGAAAGAAACAAAAGCAATGTTTGAGAAGGAACGTGAAGCTGCAAAGAAAGCTGCAGATATTGTTCCAATTGTGAAGGAGGTTCCAGTTCTTGATAATGCAACGATTGAGAAAATTTCCAGTGAAAATGAAAAGCTCAAGGCATTGGTAAATTCATTGGAAAAGAAAATTGATGAAACAGAGAAAAAGTATGAAGAGGCGAATAGAGTTAGTGAAGAAAGGTTGAAGCAAGCATCGGAGGCAGAAACAAAAATTATTCAATTAAAGACTGCTATGCAGAGGCTTGAAGAAAAGTTCTCAAATATTGAATCTGAAAATCAGATTCTTCGGCAGCAGACCTTCCTCAAAACACCAGTTAAAAAAATGGCTGACCATCTTCCTATTGCAGCAGCAGAGAAACTGGAGAATGGTAACCATTTGGTTGAAGATAATAGAATTGATGAGCAGTTTGTAACACCCGTGAAATCACTGAAGAGAATCAGCTCAGAATCTGAAATTAAGTTGAGTAGATCGCATTTTGAACACCAACATGAGAACGTGGATGCTCTTGTCAGTTGTGTCATGAATAACATTGGGTTTAGTAATGGGAAGCCTGTAGCTGCATTTACCATTTATAAATGCCTTCTTCACTGGAAATCTTTTGAAGCTGAAAAAACAAGTGTATTTGATCGCCTAATTCAGATGATTGGATCTGCAATAGAGAATCAAGAAAACAATGATCATCTGGCCTATTGGTTGTCAAACACATCTGCACTACTATTCCTGCTTCAACGAAGCTTGAAAGCTCCTGGTGCTCCTCGGAAACCTCCACCTTCAACATCCTTATTTGGAAGGATGACTATGGGTTTTCGTTCGTCTCCTTCTTCCAACAGTCTTGGATCTGCACTTAAGGTTGTGCGTCAAGTGGATGCTAAATATCCAGCTTTGCTATTCAAGCAGCAGCTAACAGCATATGTCGAAAAAATATTTGGAATTATCCGAGATAACTTGAAAAAGGAGTTGACATCATTGCTTTCTATGTGTATCCAAGCACCAAGAATGTCGAAAGGAGTACTACGGTCTGGAAGATCATTCGGGAAAGATACTCAAACAAATTACTGGCAGAGCATCATAGAAAGCCTTAACTTGCTTCTCTGTACATTGAAAGAAAATTTTGTTCCGCAAATTCTTATCCAGAATGTCTTTGTTCAAAACTTTTCGTATATTAATGTTCAACTCTTCAATAGCCTCCTTCTTCGTCGAGAATGTTGTACATTCAGCAATGGAGAATATGTAAAATCTGGGTTAGCTGAGTTGGAGCTCTGGTGCTGCCAGGCAAAGGAGGAGTACGCTGGTGCTTCTTGGGATGAGCTTAAACACATAAGACAAGCTGTTGGCTTCTTGGTTATACATCAGAAGTACAGAATTTCCTATGATGAAATCACCAATGATCTTTGCCCCATCCTGAGTGTCCAGCAACTTTATAGAATATGTACACTCTACTGGGACGACAACTATAACACTCGAAGTGTATCGCCTGATGTAATATCTAGTATGAGAGTGCTCATGACAGAGGACTCCAACAATGCAGTGAGCAGTTCCTTCCTATTGGATGACAATTCCAGCATCCCCTTCTCGGTCGAAGACCTATCAAACTCACTGCAAGAGAAAGATTTCTCGGGCGTGAAGCCAGCCGACGAACTACTCGAGAACCCAGCCTTCCAATTTTTACACGAGTAA 4557 41.17 MASATGLVVGSHVWLEDSEEAWIEGEVLEIRGEEIKVQCTSGKTVAVKAANVYPKDSEVPPCGVDDMTKLAYLHEPGVLHNLKLRYDINEIYTYTGNILIAVNPFTKLPHLYDSYMMAQYKGAAFGELSPHPFAVADAAYRHSSDSTSVNLLMVNEKKSQSILVSGESGAGKTESTKLLMRYLAYMGGRAASEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQGGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEVKKYKLGNSKDFHYLNQSNCHALDGIDDAKEYLATRKAMEVVGISSEEQDGIFRVVAAILHLGNIEFAKGKEADSSVPKDEKSWFHLRTAAELFMCDEKALEDSLCKRVIVTRDETITKWLDPNSAALSRDALAKIVYSRLFDWLVDKINNSIGQDPDSKFLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTIAHYAGDVTYQTDLFLDKNKDYVVAEHQALLSASKCSFVSCLFPPLAEESSKSSKFSSIGSRFKLQLVSLLETLSATEPHYIRCVKPNNLLKPAIFENKNILQQLRCGGVMEAIRISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVAACKRLIEKVGLKGYQIGKTKVFLRAGQMAELDALRTEILGRSASIIQRKVRSYLARRSFVLLRRSAIRLQSACRGQLAREVFEGLRREASSLMIQRNLRMHLCRKAYKEKYSSAVSIQTGMRGMAARDELRFRRRSKAAIIIQSYCRRYLAQLHYKKLKKAAITTQSAWRGRVARKELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRADLEEAKTQENEKLQSALQDMQSQLKETKAMFEKEREAAKKAADIVPIVKEVPVLDNATIEKISSENEKLKALVNSLEKKIDETEKKYEEANRVSEERLKQASEAETKIIQLKTAMQRLEEKFSNIESENQILRQQTFLKTPVKKMADHLPIAAAEKLENGNHLVEDNRIDEQFVTPVKSLKRISSESEIKLSRSHFEHQHENVDALVSCVMNNIGFSNGKPVAAFTIYKCLLHWKSFEAEKTSVFDRLIQMIGSAIENQENNDHLAYWLSNTSALLFLLQRSLKAPGAPRKPPPSTSLFGRMTMGFRSSPSSNSLGSALKVVRQVDAKYPALLFKQQLTAYVEKIFGIIRDNLKKELTSLLSMCIQAPRMSKGVLRSGRSFGKDTQTNYWQSIIESLNLLLCTLKENFVPQILIQNVFVQNFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCCQAKEEYAGASWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPDVISSMRVLMTEDSNNAVSSSFLLDDNSSIPFSVEDLSNSLQEKDFSGVKPADELLENPAFQFLHE 1518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 30969291 30984607 + MELO3C022403.2.1 Cme11g02415 343078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02415 1518 PANTHER MYOSIN 6 1516 - -
Cme11g02415 1518 Pfam DIL domain 1340 1443 IPR002710 -
Cme11g02415 1518 CDD MYSc_Myo11 76 730 IPR036018 -
Cme11g02415 1518 Coils Coil 887 964 - -
Cme11g02415 1518 Gene3D - 745 795 - -
Cme11g02415 1518 Gene3D - 796 843 - -
Cme11g02415 1518 Gene3D - 844 892 - -
Cme11g02415 1518 Pfam Myosin head (motor domain) 64 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 Gene3D - 449 633 - -
Cme11g02415 1518 PANTHER MYOSIN-14 6 1516 - -
Cme11g02415 1518 ProSiteProfiles Dilute domain profile. 1169 1464 IPR002710 -
Cme11g02415 1518 Pfam Myosin N-terminal SH3-like domain 10 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 ProSiteProfiles IQ motif profile. 747 771 IPR000048 GO:0005515
Cme11g02415 1518 ProSiteProfiles IQ motif profile. 864 893 IPR000048 GO:0005515
Cme11g02415 1518 Gene3D - 11 55 IPR008989 GO:0003774|GO:0005524|GO:0051015
Cme11g02415 1518 ProSiteProfiles IQ motif profile. 816 845 IPR000048 GO:0005515
Cme11g02415 1518 SMART DIL_2 1339 1446 IPR002710 -
Cme11g02415 1518 CDD MyosinXI_CBD 1120 1487 IPR037975 GO:0007015
Cme11g02415 1518 PRINTS Myosin heavy chain signature 206 233 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 PRINTS Myosin heavy chain signature 439 467 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 PRINTS Myosin heavy chain signature 159 184 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 PRINTS Myosin heavy chain signature 492 520 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 795 IPR027417 -
Cme11g02415 1518 SMART iq_5 840 862 IPR000048 GO:0005515
Cme11g02415 1518 SMART iq_5 792 814 IPR000048 GO:0005515
Cme11g02415 1518 SMART iq_5 744 766 IPR000048 GO:0005515
Cme11g02415 1518 SMART iq_5 767 789 IPR000048 GO:0005515
Cme11g02415 1518 SMART iq_5 815 837 IPR000048 GO:0005515
Cme11g02415 1518 SMART iq_5 863 885 IPR000048 GO:0005515
Cme11g02415 1518 Gene3D Myosin VI head, motor domain, U50 subdomain 322 611 - -
Cme11g02415 1518 ProSiteProfiles Myosin motor domain profile. 62 742 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cme11g02415 1518 Coils Coil 982 1058 - -
Cme11g02415 1518 Gene3D - 262 320 - -
Cme11g02415 1518 Gene3D - 677 741 - -
Cme11g02415 1518 Pfam IQ calmodulin-binding motif 866 885 IPR000048 GO:0005515
Cme11g02415 1518 Pfam IQ calmodulin-binding motif 843 862 IPR000048 GO:0005515
Cme11g02415 1518 Pfam IQ calmodulin-binding motif 796 814 IPR000048 GO:0005515
Cme11g02415 1518 Pfam IQ calmodulin-binding motif 747 765 IPR000048 GO:0005515
Cme11g02415 1518 Pfam IQ calmodulin-binding motif 769 786 IPR000048 GO:0005515
Cme11g02415 1518 ProSiteProfiles IQ motif profile. 841 870 IPR000048 GO:0005515
Cme11g02415 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 797 893 IPR027417 -
Cme11g02415 1518 ProSiteProfiles IQ motif profile. 768 797 IPR000048 GO:0005515
Cme11g02415 1518 ProSiteProfiles IQ motif profile. 793 822 IPR000048 GO:0005515
Cme11g02415 1518 Gene3D Kinesin motor domain 65 672 IPR036961 -
Cme11g02415 1518 SMART MYSc_2a 57 743 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00784 Cme-Chr10:5073611 Cme11g02415 Cme-Chr11:30969291 7.90E-106 dispersed
Cme01g02524 Cme-Chr1:33208856 Cme11g02415 Cme-Chr11:30969291 0 transposed
Cme02g00277 Cme-Chr2:2309626 Cme11g02415 Cme-Chr11:30969291 0 transposed
Cme03g00912 Cme-Chr3:17468056 Cme11g02415 Cme-Chr11:30969291 2.49E-10 transposed
Cme03g01384 Cme-Chr3:23322408 Cme11g02415 Cme-Chr11:30969291 0 transposed
Cme05g01814 Cme-Chr5:27032434 Cme11g02415 Cme-Chr11:30969291 0 transposed
Cme12g01479 Cme-Chr12:22450729 Cme11g02415 Cme-Chr11:30969291 8.33E-13 transposed
Cme11g02415 Cme-Chr11:30969291 Cme06g00435 Cme-Chr6:2750439 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02415 K10357 - csv:101208630 2909.78