Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02446 ATGATGAGAGAGAGAAGAAAGTGTAGTATTGTATCCCTTGTGGTTGTGGGCATAACATTGATGAGTTTATGCATCAGTGTGAGAGGTGAAAATACATTACAATCACCAGTTAAGCTAATATGGCATTACTACAAACTCAACACAACTTGTCCAAATGCTGAGGAATACATAAAACATCAGGTCAAGTTGTTTTGGCAAAAGGATAAAAGCATTACTGCCAAGTTCCTTCGTTTGCTCTCTGCAGATTGTCTTTCCAAAAATGGTTGTGATGGCTCAATACTTCTTGATGGTCCAAACTCAGAGAAAAATGCACCACAAAACAAAGGCCTCGGAGGGTTTGAAGTAATTGATAAGATCAAAATTGTACTCGAAGACAGATGCCCGGGTGTTGTTTCTTGTACAGATATTTTGAACTTAGCCACTAGAGATGCTGCCCATTTGGCAGGTGCACCATCTTATCCTGTTTTTACAGGAAGGAGGGATGGTTTTACAAGCAGTATTGATGCAGTGGATTTACCATCTCCCTCCATATCATTGCAGCAAGGGATTCAATATTTCCAATCTAAGGGTCTCGATGTTTTGGACATGACAACATTGCTAGGTGCACATTCAATGGGAAAAACACACTGTCGATACATCATGGATAGGCTATACAATTTCAATGGCACCAGAAAGCCAGATCCATCAATGCACAAATCACTCTTAAAAGACCTTCGAAAGAAATGCCCAAAGAATTCAAAACAAGACCCAACAGTGAACCTAACACCAAAATCTGGAAACGACTATCAATTCACAACTCTTTACTACTCGAGAATCCTCTCCAGAAAGGCGGTACTCGGTCTCGATCAACAGCTTCTTTTCGGTGACGAAACTAAAGAAATCGTCGAGGAGTTTGCTGATCCAAAAACTGGATTTGAAGACTTCCGTCGGTCCTTTGCTTTGTCCATGAGTAGGATGGGAAACATCAAGGTTTTGACCGGAAAAAATGGCGAGATTCGACGAGATTGTCGGCGAAGAAACTAG 1023 41.06 MMRERRKCSIVSLVVVGITLMSLCISVRGENTLQSPVKLIWHYYKLNTTCPNAEEYIKHQVKLFWQKDKSITAKFLRLLSADCLSKNGCDGSILLDGPNSEKNAPQNKGLGGFEVIDKIKIVLEDRCPGVVSCTDILNLATRDAAHLAGAPSYPVFTGRRDGFTSSIDAVDLPSPSISLQQGIQYFQSKGLDVLDMTTLLGAHSMGKTHCRYIMDRLYNFNGTRKPDPSMHKSLLKDLRKKCPKNSKQDPTVNLTPKSGNDYQFTTLYYSRILSRKAVLGLDQQLLFGDETKEIVEEFADPKTGFEDFRRSFALSMSRMGNIKVLTGKNGEIRRDCRRRN 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31195476 31197381 - MELO3C022435.2.1 Cme11g02446 343109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02446 340 PANTHER PEROXIDASE 25-RELATED 17 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 CDD secretory_peroxidase 38 338 IPR033905 GO:0004601|GO:0042744
Cme11g02446 340 ProSiteProfiles Plant heme peroxidase family profile. 38 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 SUPERFAMILY Heme-dependent peroxidases 45 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 Gene3D Peroxidase, domain 2 173 319 - -
Cme11g02446 340 PANTHER PEROXIDASE 61-RELATED 17 338 - -
Cme11g02446 340 Gene3D - 43 340 - -
Cme11g02446 340 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Cme11g02446 340 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme11g02446 340 Pfam Peroxidase 58 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g02446 Cme-Chr11:31195476 Cme05g00100 Cme-Chr5:631104 2.33E-71 dispersed
Cme11g02446 Cme-Chr11:31195476 Cme08g00553 Cme-Chr8:3469424 7.56E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02446 K00430 - csv:101213667 610.912