Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02458 ATGCACACAACCCAACTCCAGATGGAAGTGCAAGATCATGGTCACATAATTGAAGTGTGTGGAGATGTGCAAGCTGTAGGGCCAAGCATTGTGGGAAGTAAAATTTGTGGGGATGCACCTTCTTGCGGATTTTCTGATGCAAAGAACAGCTCGAAAGACGCAAAGGAGCGATCTGCATCCATGCGAAAGCTTTGCATAGCAGTTGTTCTTTGCATCGTTTTTATGAGTGTAGAAGTAGTCGGAGGTATCAAAGCAAACAGTCTTGCAATATTGACTGATGCTGCTCATTTGTTGTCAGATGTTGCTGCTTTTGCTATTTCTTTGTTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCGTATGGTTTCTTCCGTATTGAAATACTTGGTGCTCTTGTTTCCATTCAGATGATCTGGCTTCTTGCTGGAATTCTTGTTTACGAAGCTATTGTCCGTCTTATCAATGGTCCGGGAGAAGTTAAGGGGTTGCTCATGTTTGCTGTTTCTACATTTGGGTTAGTTGTGAACATAGCCATGGCTCTGCTACTTGGTCATGAACATGGTCATGCCCATTCTCATGGTCACAATCATGGACATGGTGAGCATGACCATGGTCATGGCAGCCACGAACATGGTGAGGAAGATCATAGACATCGTCATGGAATAAGTGTGACCATGCACCACCACCACCATGATGAGAAGGGAGCTGCCAGCGATGGTGTTGAGCACCACCACCACCATCACGAACACAAGGAATCAACAACTGTCCCCTTGCTTGATAGTTCACGAAAGGTTACAAAAACGCAAAAGAAACAACGGAACATAAATGTACAGGGGGCTTATCTTCATGTACTTGGAGATTCCATCCAAAGCATCGGGGTAATGATCGGTGGGGCAATCATATGGTATAGACCAGAATACATGATTCTTGATCTGATATGCACCCTCATTTTCTCTGCGATTGTGTTGTGCACAACAATTCAAATGCTTAGAAATATCCTTGAGGTTTTGATGGAGAGCACGCCTCGGGAGGTGGATGCAACAAAGCTCGAAAAGGGTTTGTGTGAGATGGAGGAGGTAGTTGCAATCCATGAACTGCACATTTGGGCCATAACTGTTGGGAAGATTCTATTGGCATGTCATGTTATAATAAAGCCAGAGGCAAATGCAGACATGGTATTGGACAAAGTCATTGAGTATATTAGAAGAGAGTACAACATCAGCCATGTTACCATTCAGATAGAGCGTCAATAG 1263 44.5 MHTTQLQMEVQDHGHIIEVCGDVQAVGPSIVGSKICGDAPSCGFSDAKNSSKDAKERSASMRKLCIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSTFGLVVNIAMALLLGHEHGHAHSHGHNHGHGEHDHGHGSHEHGEEDHRHRHGISVTMHHHHHDEKGAASDGVEHHHHHHEHKESTTVPLLDSSRKVTKTQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYRPEYMILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREVDATKLEKGLCEMEEVVAIHELHIWAITVGKILLACHVIIKPEANADMVLDKVIEYIRREYNISHVTIQIERQ 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31288602 31293142 + MELO3C022448.2.1 Cme11g02458 343121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02458 420 MobiDBLite consensus disorder prediction 191 265 - -
Cme11g02458 420 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 9 419 - -
Cme11g02458 420 SUPERFAMILY Cation efflux protein transmembrane domain-like 58 342 IPR027469 -
Cme11g02458 420 MobiDBLite consensus disorder prediction 199 260 - -
Cme11g02458 420 TIGRFAM CDF: cation diffusion facilitator family transporter 61 420 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cme11g02458 420 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 349 418 IPR036837 -
Cme11g02458 420 Pfam Cation efflux family 65 341 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Cme11g02458 420 Gene3D Cation efflux protein transmembrane domain 60 340 IPR027469 -
Cme11g02458 420 PANTHER METAL TOLERANCE PROTEIN A1 9 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01933 Cme-Chr4:27027726 Cme11g02458 Cme-Chr11:31288602 1.22E-11 dispersed
Cme11g02458 Cme-Chr11:31288602 Cme12g00138 Cme-Chr12:1340424 6.50E-48 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02458 K14689 - csv:101213602 729.169