Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g02458 | ATGCACACAACCCAACTCCAGATGGAAGTGCAAGATCATGGTCACATAATTGAAGTGTGTGGAGATGTGCAAGCTGTAGGGCCAAGCATTGTGGGAAGTAAAATTTGTGGGGATGCACCTTCTTGCGGATTTTCTGATGCAAAGAACAGCTCGAAAGACGCAAAGGAGCGATCTGCATCCATGCGAAAGCTTTGCATAGCAGTTGTTCTTTGCATCGTTTTTATGAGTGTAGAAGTAGTCGGAGGTATCAAAGCAAACAGTCTTGCAATATTGACTGATGCTGCTCATTTGTTGTCAGATGTTGCTGCTTTTGCTATTTCTTTGTTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCGTATGGTTTCTTCCGTATTGAAATACTTGGTGCTCTTGTTTCCATTCAGATGATCTGGCTTCTTGCTGGAATTCTTGTTTACGAAGCTATTGTCCGTCTTATCAATGGTCCGGGAGAAGTTAAGGGGTTGCTCATGTTTGCTGTTTCTACATTTGGGTTAGTTGTGAACATAGCCATGGCTCTGCTACTTGGTCATGAACATGGTCATGCCCATTCTCATGGTCACAATCATGGACATGGTGAGCATGACCATGGTCATGGCAGCCACGAACATGGTGAGGAAGATCATAGACATCGTCATGGAATAAGTGTGACCATGCACCACCACCACCATGATGAGAAGGGAGCTGCCAGCGATGGTGTTGAGCACCACCACCACCATCACGAACACAAGGAATCAACAACTGTCCCCTTGCTTGATAGTTCACGAAAGGTTACAAAAACGCAAAAGAAACAACGGAACATAAATGTACAGGGGGCTTATCTTCATGTACTTGGAGATTCCATCCAAAGCATCGGGGTAATGATCGGTGGGGCAATCATATGGTATAGACCAGAATACATGATTCTTGATCTGATATGCACCCTCATTTTCTCTGCGATTGTGTTGTGCACAACAATTCAAATGCTTAGAAATATCCTTGAGGTTTTGATGGAGAGCACGCCTCGGGAGGTGGATGCAACAAAGCTCGAAAAGGGTTTGTGTGAGATGGAGGAGGTAGTTGCAATCCATGAACTGCACATTTGGGCCATAACTGTTGGGAAGATTCTATTGGCATGTCATGTTATAATAAAGCCAGAGGCAAATGCAGACATGGTATTGGACAAAGTCATTGAGTATATTAGAAGAGAGTACAACATCAGCCATGTTACCATTCAGATAGAGCGTCAATAG | 1263 | 44.5 | MHTTQLQMEVQDHGHIIEVCGDVQAVGPSIVGSKICGDAPSCGFSDAKNSSKDAKERSASMRKLCIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIVRLINGPGEVKGLLMFAVSTFGLVVNIAMALLLGHEHGHAHSHGHNHGHGEHDHGHGSHEHGEEDHRHRHGISVTMHHHHHDEKGAASDGVEHHHHHHEHKESTTVPLLDSSRKVTKTQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWYRPEYMILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREVDATKLEKGLCEMEEVVAIHELHIWAITVGKILLACHVIIKPEANADMVLDKVIEYIRREYNISHVTIQIERQ | 420 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31288602 | 31293142 | + | MELO3C022448.2.1 | Cme11g02458 | 343121 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g02458 | 420 | MobiDBLite | consensus disorder prediction | 191 | 265 | - | - | |
Cme11g02458 | 420 | PANTHER | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER | 9 | 419 | - | - | |
Cme11g02458 | 420 | SUPERFAMILY | Cation efflux protein transmembrane domain-like | 58 | 342 | IPR027469 | - | |
Cme11g02458 | 420 | MobiDBLite | consensus disorder prediction | 199 | 260 | - | - | |
Cme11g02458 | 420 | TIGRFAM | CDF: cation diffusion facilitator family transporter | 61 | 420 | IPR002524 | GO:0006812|GO:0008324|GO:0016021|GO:0055085 | |
Cme11g02458 | 420 | SUPERFAMILY | Cation efflux protein cytoplasmic domain-like | 349 | 418 | IPR036837 | - | |
Cme11g02458 | 420 | Pfam | Cation efflux family | 65 | 341 | IPR002524 | GO:0006812|GO:0008324|GO:0016021|GO:0055085 | |
Cme11g02458 | 420 | Gene3D | Cation efflux protein transmembrane domain | 60 | 340 | IPR027469 | - | |
Cme11g02458 | 420 | PANTHER | METAL TOLERANCE PROTEIN A1 | 9 | 419 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g01933 | Cme-Chr4:27027726 | Cme11g02458 | Cme-Chr11:31288602 | 1.22E-11 | dispersed | |
Cme11g02458 | Cme-Chr11:31288602 | Cme12g00138 | Cme-Chr12:1340424 | 6.50E-48 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g02458 | K14689 | - | csv:101213602 | 729.169 |