Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme11g02535 | ATGGATAATTACGGTTCTTCACCTCCATATCCATATCACAATCCTTACCCATACCCTCGTCCAATTCCATCTCCTCAATACCCACATCCTTCTCAATATCCACCTCCTTCTCAGTACCCTCCTCCTCATTACACACATCCAAATTCAGATCCATATGCTCCTCCTCCTTACACTTACCCCTATAATAATCCTTCACATCCCTCACCATTTGCATATCCCCCACCCCCATCTCATTCTGGCCCTGTTGAGTATTTTCCACACCCACCCCAACATTCTTCCCCTCTACCTTACCCATATCCTTACTCTGATGCCTCTTCCACTAATGCTGCTGCTAGGCCCTCTATTCAATATCATAACAGTTTCCTACCTGGTTCATCCCCATATCGGTATCAAGAATCTAATGCCTACCCTCCACCTGAAACTCAATACCCACCACCCCCTTCACGAGTAAATAGCTTCTCTGGCCACTATAGGAATGATAACACTGATTCCGTCTCGTCTGTCGCTTCTGCGTACCCACCTCTGGATAACCTTTTGTGCAATGTACATTTATCTGATCATCAACCAACTGCTCCTGCATCACCTCCTGCACCTGCTGCAGCACCTTCACCTGTACAGCCTTCACCTGCACAGCCTTCACCTTCGTTATTGGCTAATTCACCTCAAAGTGCTAGATATGATCGCCGTGACCGGTTTTATGGCTTTCCGAATTCATCCTTTTCAAGTTTCGACACGGGGAATTCAGATCAAATGATTTCATCCAAACAACCTTCGTTTTCCCATTCAAGCTCATTCAGTGGTTCTCAACATAGCCAGAACTTGCAGATTGTTCCACTGCACGGTAAAGCATCTTTGAAAGTTCTGCTGTTGCATGGAAACTTAGAAATTTGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAAACCTTGGGGGATATGTTTGCAAAATTTCCTGGGAACATGAGCAACAAAATTGAAGGACACGTAAGTCATAAGATCACTAGTGATCCTTATGTATCGATCAATGTAACAAATGCAGTAATTGGGAGGACTTTTGTTATAAGCAACACTGAAAATCCTGTATGGAGGCAACATTTCTATGTACCCGTTGCACATTATGCTGCTGAAGTAGTTTTTGTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTAATAGGAACTGTGGCAATTCCTGCTGAACAAATATATTCAGGGTCTATGGTTGAGGGAACCTTCCCAATCCTACTTGGTGGGAAGCCATGTAAGCCTGGAGCTGCTCTAAGTATTTCTATTCAATATACCCCAATGGAGAGGCTTAGCACTTATCACCATGGAGTGGGAGCTGGCCCTGATTATCAGGGGGTTCCTGATACGTATTTTCCCCTCAGAAAGGGTGGAGCCGTCACTCTTTATCAAGATGCCCATGTTCCAGACGGACACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTGCATGGGAAGTGTTGGCATGACATTTTTGATGCTGTACGACAGGCTCGCAGGTTAATTTACATAACTGGGTGGTCAGTGTGGCACAAAGTGAAATTAGTTCGAGATACTGGCTATGGAACAGAGTGTACCCTTGGAGATCTTCTGAGGTCAAAGTCCCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAACACTCCTCTGTACAAGTGATACTTTGTCCTCGGATTGCTGGAAAACGACATAGCTGGGTTAAGCAAAAGGAAGTTGGAACTATATATACACATCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAGATCATAGCTTTTGTTGGAGGGCTTGATTTATGTGATGGGCGGTATGATACTCCATCACATCCCATCTTTCGGACCCTTCAAACAGTACACAAGGACGATTACCACAATCCTACATACACGGGTAGTGTTGTTGGTTGTCCAAGAGAACCATGGCATGATCTACACAGCAAAATCGATGGTCCAGCAGCATATGATGTTCTGACTAACTTTGAGGAGCGATGGAGGAGGGCTTCAAAACCTCACGGGATAAAGAAGTTGAAATCATATGATGATGCTTTGCTGAGTATTGAAAGAATTCATGACATAATTGGAATTTCTGAAGCACACTGCACTAATGAAAATGACCCTGAATCATGGCATGTGCAGATTTTTCGGTCAATCGATTCAACTTCTGTTAAAGATTTTCCGAAGGAACCAAAAGATGCCCCAAGCAAGAACCTCGTATGTGGAAAAAATGTGTTGATTGACATGAGTATACACACAGCATACGTGAAAGCCATTCGAGCTGCGCAACATTACATTTATATAGAGAACCAGTATTTCATCGGGTCATCCTTCAATTGGAATTCAAATAAAGATATAGGTGCCAACAATTTGATTCCAATGGAAATTGCCCTTAAGATTGCTGATAAAATCAGAGCAAATGAAAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCTGAGGGTGTTCCAACCGCTGCTGCCACTCAGAGAATACTATTTTGGCAGCAAAAAACCATGCAAATGATGTATGAGGTGATTTACAAGGCTTTGATGGAGGTTGGTCTTGAGGAGGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGCCTGGGAAATCGTGAGGCTATGGATGGAAATGATCCTTTATGTTCTGGAAGTCCTAATGGAGAAAACACTCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGATATATGTTCACTCCAAAGGCATGATAGTTGACGACGAGTATGTGATTTTGGGATCTGCCAACATCAACCAGAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCCCATTATACGTGGGCAAGGAAACTTTCACATCCTCGTGGACAGATCTATGGATATAGGATGTCGTTGTGGGCGGAGCATATGGGAACTACCAATGAGTGTTTCAACCAACCGGAGAGCCTAGAATGCGTGAAAAGAGTTAGAACAATGGGAGAATTAAACTGGAAGCAGTTTGCTGCAGATGATGTAACAGAGATGAGAGGACACCTTCTGAAATACCCAGTTGAAGTTGATAGAAGAGGGAGAGTAAGATCTCTTCCTGGTCATGAAAATTTTCCGGATGTTGGAGGAAAAATAGTTGGTTCATTTCTTGGAATTCAGGAGAACCTCACTATCTAA | 3312 | 43.06 | MDNYGSSPPYPYHNPYPYPRPIPSPQYPHPSQYPPPSQYPPPHYTHPNSDPYAPPPYTYPYNNPSHPSPFAYPPPPSHSGPVEYFPHPPQHSSPLPYPYPYSDASSTNAAARPSIQYHNSFLPGSSPYRYQESNAYPPPETQYPPPPSRVNSFSGHYRNDNTDSVSSVASAYPPLDNLLCNVHLSDHQPTAPASPPAPAAAPSPVQPSPAQPSPSLLANSPQSARYDRRDRFYGFPNSSFSSFDTGNSDQMISSKQPSFSHSSSFSGSQHSQNLQIVPLHGKASLKVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFAKFPGNMSNKIEGHVSHKITSDPYVSINVTNAVIGRTFVISNTENPVWRQHFYVPVAHYAAEVVFVVKDSDVVGSQLIGTVAIPAEQIYSGSMVEGTFPILLGGKPCKPGAALSISIQYTPMERLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVHGKCWHDIFDAVRQARRLIYITGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRIAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPSHPIFRTLQTVHKDDYHNPTYTGSVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLSIERIHDIIGISEAHCTNENDPESWHVQIFRSIDSTSVKDFPKEPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEEAFSPQDYLNFFCLGNREAMDGNDPLCSGSPNGENTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSHPRGQIYGYRMSLWAEHMGTTNECFNQPESLECVKRVRTMGELNWKQFAADDVTEMRGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIQENLTI | 1103 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31792866 | 31802405 | + | MELO3C022519.2.1 | Cme11g02535 | 343198 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme11g02535 | 1103 | Pfam | C2 domain | 292 | 418 | IPR000008 | - | |
Cme11g02535 | 1103 | MobiDBLite | consensus disorder prediction | 244 | 267 | - | - | |
Cme11g02535 | 1103 | SUPERFAMILY | Phospholipase D/nuclease | 753 | 1035 | - | - | |
Cme11g02535 | 1103 | MobiDBLite | consensus disorder prediction | 10 | 96 | - | - | |
Cme11g02535 | 1103 | MobiDBLite | consensus disorder prediction | 185 | 223 | - | - | |
Cme11g02535 | 1103 | Pfam | Phospholipase D Active site motif | 617 | 651 | IPR001736 | GO:0003824 | |
Cme11g02535 | 1103 | Pfam | Phospholipase D Active site motif | 950 | 976 | IPR001736 | GO:0003824 | |
Cme11g02535 | 1103 | PANTHER | PHOSPHOLIPASE D ALPHA 1 | 200 | 1103 | - | - | |
Cme11g02535 | 1103 | Pfam | Phospholipase D C terminal | 1024 | 1093 | IPR024632 | - | |
Cme11g02535 | 1103 | MobiDBLite | consensus disorder prediction | 99 | 137 | - | - | |
Cme11g02535 | 1103 | Gene3D | C2 domain | 287 | 430 | IPR035892 | - | |
Cme11g02535 | 1103 | ProSiteProfiles | C2 domain profile. | 270 | 416 | IPR000008 | - | |
Cme11g02535 | 1103 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 949 | 976 | IPR001736 | GO:0003824 | |
Cme11g02535 | 1103 | MobiDBLite | consensus disorder prediction | 1 | 169 | - | - | |
Cme11g02535 | 1103 | SMART | pld_4 | 949 | 976 | IPR001736 | GO:0003824 | |
Cme11g02535 | 1103 | SMART | pld_4 | 616 | 651 | IPR001736 | GO:0003824 | |
Cme11g02535 | 1103 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 290 | 439 | IPR035892 | - | |
Cme11g02535 | 1103 | Gene3D | Endonuclease Chain A | 494 | 730 | - | - | |
Cme11g02535 | 1103 | PANTHER | PHOSPHOLIPASE D | 200 | 1103 | IPR015679 | - | |
Cme11g02535 | 1103 | SUPERFAMILY | Phospholipase D/nuclease | 457 | 715 | - | - | |
Cme11g02535 | 1103 | Gene3D | Endonuclease Chain A | 762 | 999 | - | - | |
Cme11g02535 | 1103 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 616 | 651 | IPR001736 | GO:0003824 | |
Cme11g02535 | 1103 | MobiDBLite | consensus disorder prediction | 147 | 169 | - | - | |
Cme11g02535 | 1103 | SMART | C2_3c | 293 | 415 | IPR000008 | - | |
Cme11g02535 | 1103 | CDD | C2_plant_PLD | 286 | 438 | - | - | |
Cme11g02535 | 1103 | MobiDBLite | consensus disorder prediction | 191 | 211 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme06g02664 | Cme-Chr6:33733869 | Cme11g02535 | Cme-Chr11:31792866 | 0 | dispersed | |
Cme07g02065 | Cme-Chr7:25517572 | Cme11g02535 | Cme-Chr11:31792866 | 0 | dispersed | |
Cme08g00969 | Cme-Chr8:6372261 | Cme11g02535 | Cme-Chr11:31792866 | 0 | dispersed | |
Cme11g02046 | Cme-Chr11:28223054 | Cme11g02535 | Cme-Chr11:31792866 | 1.19E-16 | dispersed | |
Cme11g02535 | Cme-Chr11:31792866 | Cme03g01617 | Cme-Chr3:25062581 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme11g02535 | K01115 | - | csv:101218942 | 2008.42 |