Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme11g02535 ATGGATAATTACGGTTCTTCACCTCCATATCCATATCACAATCCTTACCCATACCCTCGTCCAATTCCATCTCCTCAATACCCACATCCTTCTCAATATCCACCTCCTTCTCAGTACCCTCCTCCTCATTACACACATCCAAATTCAGATCCATATGCTCCTCCTCCTTACACTTACCCCTATAATAATCCTTCACATCCCTCACCATTTGCATATCCCCCACCCCCATCTCATTCTGGCCCTGTTGAGTATTTTCCACACCCACCCCAACATTCTTCCCCTCTACCTTACCCATATCCTTACTCTGATGCCTCTTCCACTAATGCTGCTGCTAGGCCCTCTATTCAATATCATAACAGTTTCCTACCTGGTTCATCCCCATATCGGTATCAAGAATCTAATGCCTACCCTCCACCTGAAACTCAATACCCACCACCCCCTTCACGAGTAAATAGCTTCTCTGGCCACTATAGGAATGATAACACTGATTCCGTCTCGTCTGTCGCTTCTGCGTACCCACCTCTGGATAACCTTTTGTGCAATGTACATTTATCTGATCATCAACCAACTGCTCCTGCATCACCTCCTGCACCTGCTGCAGCACCTTCACCTGTACAGCCTTCACCTGCACAGCCTTCACCTTCGTTATTGGCTAATTCACCTCAAAGTGCTAGATATGATCGCCGTGACCGGTTTTATGGCTTTCCGAATTCATCCTTTTCAAGTTTCGACACGGGGAATTCAGATCAAATGATTTCATCCAAACAACCTTCGTTTTCCCATTCAAGCTCATTCAGTGGTTCTCAACATAGCCAGAACTTGCAGATTGTTCCACTGCACGGTAAAGCATCTTTGAAAGTTCTGCTGTTGCATGGAAACTTAGAAATTTGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAAACCTTGGGGGATATGTTTGCAAAATTTCCTGGGAACATGAGCAACAAAATTGAAGGACACGTAAGTCATAAGATCACTAGTGATCCTTATGTATCGATCAATGTAACAAATGCAGTAATTGGGAGGACTTTTGTTATAAGCAACACTGAAAATCCTGTATGGAGGCAACATTTCTATGTACCCGTTGCACATTATGCTGCTGAAGTAGTTTTTGTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTAATAGGAACTGTGGCAATTCCTGCTGAACAAATATATTCAGGGTCTATGGTTGAGGGAACCTTCCCAATCCTACTTGGTGGGAAGCCATGTAAGCCTGGAGCTGCTCTAAGTATTTCTATTCAATATACCCCAATGGAGAGGCTTAGCACTTATCACCATGGAGTGGGAGCTGGCCCTGATTATCAGGGGGTTCCTGATACGTATTTTCCCCTCAGAAAGGGTGGAGCCGTCACTCTTTATCAAGATGCCCATGTTCCAGACGGACACCTTCCAAATTTGATGCTTGATAATGGTATGTACTATGTGCATGGGAAGTGTTGGCATGACATTTTTGATGCTGTACGACAGGCTCGCAGGTTAATTTACATAACTGGGTGGTCAGTGTGGCACAAAGTGAAATTAGTTCGAGATACTGGCTATGGAACAGAGTGTACCCTTGGAGATCTTCTGAGGTCAAAGTCCCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAACACTCCTCTGTACAAGTGATACTTTGTCCTCGGATTGCTGGAAAACGACATAGCTGGGTTAAGCAAAAGGAAGTTGGAACTATATATACACATCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAGATCATAGCTTTTGTTGGAGGGCTTGATTTATGTGATGGGCGGTATGATACTCCATCACATCCCATCTTTCGGACCCTTCAAACAGTACACAAGGACGATTACCACAATCCTACATACACGGGTAGTGTTGTTGGTTGTCCAAGAGAACCATGGCATGATCTACACAGCAAAATCGATGGTCCAGCAGCATATGATGTTCTGACTAACTTTGAGGAGCGATGGAGGAGGGCTTCAAAACCTCACGGGATAAAGAAGTTGAAATCATATGATGATGCTTTGCTGAGTATTGAAAGAATTCATGACATAATTGGAATTTCTGAAGCACACTGCACTAATGAAAATGACCCTGAATCATGGCATGTGCAGATTTTTCGGTCAATCGATTCAACTTCTGTTAAAGATTTTCCGAAGGAACCAAAAGATGCCCCAAGCAAGAACCTCGTATGTGGAAAAAATGTGTTGATTGACATGAGTATACACACAGCATACGTGAAAGCCATTCGAGCTGCGCAACATTACATTTATATAGAGAACCAGTATTTCATCGGGTCATCCTTCAATTGGAATTCAAATAAAGATATAGGTGCCAACAATTTGATTCCAATGGAAATTGCCCTTAAGATTGCTGATAAAATCAGAGCAAATGAAAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCTGAGGGTGTTCCAACCGCTGCTGCCACTCAGAGAATACTATTTTGGCAGCAAAAAACCATGCAAATGATGTATGAGGTGATTTACAAGGCTTTGATGGAGGTTGGTCTTGAGGAGGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGCCTGGGAAATCGTGAGGCTATGGATGGAAATGATCCTTTATGTTCTGGAAGTCCTAATGGAGAAAACACTCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGATATATGTTCACTCCAAAGGCATGATAGTTGACGACGAGTATGTGATTTTGGGATCTGCCAACATCAACCAGAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCCCATTATACGTGGGCAAGGAAACTTTCACATCCTCGTGGACAGATCTATGGATATAGGATGTCGTTGTGGGCGGAGCATATGGGAACTACCAATGAGTGTTTCAACCAACCGGAGAGCCTAGAATGCGTGAAAAGAGTTAGAACAATGGGAGAATTAAACTGGAAGCAGTTTGCTGCAGATGATGTAACAGAGATGAGAGGACACCTTCTGAAATACCCAGTTGAAGTTGATAGAAGAGGGAGAGTAAGATCTCTTCCTGGTCATGAAAATTTTCCGGATGTTGGAGGAAAAATAGTTGGTTCATTTCTTGGAATTCAGGAGAACCTCACTATCTAA 3312 43.06 MDNYGSSPPYPYHNPYPYPRPIPSPQYPHPSQYPPPSQYPPPHYTHPNSDPYAPPPYTYPYNNPSHPSPFAYPPPPSHSGPVEYFPHPPQHSSPLPYPYPYSDASSTNAAARPSIQYHNSFLPGSSPYRYQESNAYPPPETQYPPPPSRVNSFSGHYRNDNTDSVSSVASAYPPLDNLLCNVHLSDHQPTAPASPPAPAAAPSPVQPSPAQPSPSLLANSPQSARYDRRDRFYGFPNSSFSSFDTGNSDQMISSKQPSFSHSSSFSGSQHSQNLQIVPLHGKASLKVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFAKFPGNMSNKIEGHVSHKITSDPYVSINVTNAVIGRTFVISNTENPVWRQHFYVPVAHYAAEVVFVVKDSDVVGSQLIGTVAIPAEQIYSGSMVEGTFPILLGGKPCKPGAALSISIQYTPMERLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGMYYVHGKCWHDIFDAVRQARRLIYITGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRIAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPSHPIFRTLQTVHKDDYHNPTYTGSVVGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLSIERIHDIIGISEAHCTNENDPESWHVQIFRSIDSTSVKDFPKEPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEEAFSPQDYLNFFCLGNREAMDGNDPLCSGSPNGENTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSHPRGQIYGYRMSLWAEHMGTTNECFNQPESLECVKRVRTMGELNWKQFAADDVTEMRGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIQENLTI 1103
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31792866 31802405 + MELO3C022519.2.1 Cme11g02535 343198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme11g02535 1103 Pfam C2 domain 292 418 IPR000008 -
Cme11g02535 1103 MobiDBLite consensus disorder prediction 244 267 - -
Cme11g02535 1103 SUPERFAMILY Phospholipase D/nuclease 753 1035 - -
Cme11g02535 1103 MobiDBLite consensus disorder prediction 10 96 - -
Cme11g02535 1103 MobiDBLite consensus disorder prediction 185 223 - -
Cme11g02535 1103 Pfam Phospholipase D Active site motif 617 651 IPR001736 GO:0003824
Cme11g02535 1103 Pfam Phospholipase D Active site motif 950 976 IPR001736 GO:0003824
Cme11g02535 1103 PANTHER PHOSPHOLIPASE D ALPHA 1 200 1103 - -
Cme11g02535 1103 Pfam Phospholipase D C terminal 1024 1093 IPR024632 -
Cme11g02535 1103 MobiDBLite consensus disorder prediction 99 137 - -
Cme11g02535 1103 Gene3D C2 domain 287 430 IPR035892 -
Cme11g02535 1103 ProSiteProfiles C2 domain profile. 270 416 IPR000008 -
Cme11g02535 1103 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 949 976 IPR001736 GO:0003824
Cme11g02535 1103 MobiDBLite consensus disorder prediction 1 169 - -
Cme11g02535 1103 SMART pld_4 949 976 IPR001736 GO:0003824
Cme11g02535 1103 SMART pld_4 616 651 IPR001736 GO:0003824
Cme11g02535 1103 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 290 439 IPR035892 -
Cme11g02535 1103 Gene3D Endonuclease Chain A 494 730 - -
Cme11g02535 1103 PANTHER PHOSPHOLIPASE D 200 1103 IPR015679 -
Cme11g02535 1103 SUPERFAMILY Phospholipase D/nuclease 457 715 - -
Cme11g02535 1103 Gene3D Endonuclease Chain A 762 999 - -
Cme11g02535 1103 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 616 651 IPR001736 GO:0003824
Cme11g02535 1103 MobiDBLite consensus disorder prediction 147 169 - -
Cme11g02535 1103 SMART C2_3c 293 415 IPR000008 -
Cme11g02535 1103 CDD C2_plant_PLD 286 438 - -
Cme11g02535 1103 MobiDBLite consensus disorder prediction 191 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02664 Cme-Chr6:33733869 Cme11g02535 Cme-Chr11:31792866 0 dispersed
Cme07g02065 Cme-Chr7:25517572 Cme11g02535 Cme-Chr11:31792866 0 dispersed
Cme08g00969 Cme-Chr8:6372261 Cme11g02535 Cme-Chr11:31792866 0 dispersed
Cme11g02046 Cme-Chr11:28223054 Cme11g02535 Cme-Chr11:31792866 1.19E-16 dispersed
Cme11g02535 Cme-Chr11:31792866 Cme03g01617 Cme-Chr3:25062581 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme11g02535 K01115 - csv:101218942 2008.42