Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00060 ATGAGAATGATGAAGAAATTTATGGGGTTCTATCCTTTATCTTCTGGACATTTACACTCATTGCTCTCTTCAAATATGTTTTCATTGTCATGTCAGCCGATTTTTGCAGCTCATCCTAACCTCAGAGCAGAAAAGATTCAAAATATTCAAAAAATAGAAGAAATAAGGGGTACCTTTGCATTGTACTCTCTTCTTTGCCGTCATGCTAGATTATGCATTCTGCCGAATCAAGAGCCTATGGATGATAAATTATCTGCTTATGACATTAAGGGGATCTTGGAGACAAGGTCGAGTGCTGCTCTAAAGTCCTTTTTTCGACTGCATCCATCTTTTCGAAGAGGTTTTTTGTTGTTTGTTCTCTTTGGAACCTGCATGGCTATTGGTGATGGAGTGCTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCAGGAGTCAAACATAAGATCCCTGGACTCCATGAGAACTATATTGTTTTAATCTCATGCGTCATCTTGGTTGGACTGTTCTCCCTCCAGCATCGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATTATGGCGTGGCTTGTCTGTATTAGCGTTATCGGAATATATAATATCATCAAATGGAACCCAAGTATATATCATGCACTCTCTCCCGTTTATATGCTAAAATTCCTTCGAAGCACAGGTGTTGAAGGTTGGATTTCATTAGGCGGAGTTGTTCTCTCAATTACAGGAGCGAGATGCTTATGGGATATTGTCATAGGTGTGGAGGCCATGTTTGCTGATTTAGGCCACTTCTCTTCACTTTCAATCAAGATTGCCTTCACATTTCTTGTCTATCCCTCCTTGATACTTGCTTATTTGGGTGAGGCTGCATTCCTCTCTAAGCACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCTGTGTTTTGGCCGGTGTTTGTCGTGGCCACTTTTGCTTCTGTCATAGGAAGTCAGGCTGTGATTTCGGCTACATTCTCCCTCGTAAACCAGTGTTGTGCTCTGAATTGTTTCCCTCATGTGAAAACTATGCACACCTCAAACCAGATATATGGACAGATTTATATCCCAGAAGTTAATTGGATGTTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACAAGCATGATAGGCCATGCATATGGGCTGGCAGTCACCTTCGTTATGTTTGTCTCAACTTGCTTGATGACACTTGTAATTATAATTGTTTGGAAGCTGAGATTGATCAATGCCATAGCGTTTTTCATGTTTTTCGGGTCGATTGAACTACTTTACATCTCTGCATCAATCATCAAAGTTCATGAAGGTGGTTGGATCCCCCTCGTGCTTTCTACAATCTTTATGTGTTCGATGTATACATGGTACTATGGAACGATGAAGAAACACGAATATGACGATGAGAACAAAGTGTCAATGAATAGGATTCTTTCTTCGGGGCCTAGTCTTGGCATAGTGCGTGTGCCCGGAATTGGACTCATATACACTAATCTGGTTGCTGGCGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCTGCATTTCATCAAGTGCTTGTATTTGTTTGTATAAAATATGTTCAAGTTCCCCATATCGATGAAGAAGATCGTTTGCTCGTCACGAGGGTAGGTCCAAAAGAATGCAAAATGTTTCGATGCATTGTCCGATACGGTTACAGGGATTTACTACAAGAAAACTACAATTTTGAGAACAAATTAGTGTTTTCTTTAGTCCATTATGTAGAAACAGAAGATCAGTTTTGTAAACCAATGACAGAAGTCTCTAGAGGGTGTAAAAATTCAAAAGAACCCTGTGAATATGAATTACAATTGGAGCAAGCTTTTACAAGCTCAAACAAATATCAAGCAATGGATACCGCAGTCGATGATCGGGAAAAGTCTATATATAACGAGGAAGCAATGCATATATTGAGAGCGAAAGAATCAGGAATCACATACATCTTTGGACATTGCTCAGTCAAGGCCAAGAAATCATCTTCCATTTTCAAGAAGTTAGCCATTGATATTATGTATGCTTTTTTGAACCAGAATTGTAGAGAGCAAGAGGTTTTACTAAATGTGCCTCATACCTCTCTATTGGAAGTTGGGATGGTATATTATGTATAG 2160 39.72 MRMMKKFMGFYPLSSGHLHSLLSSNMFSLSCQPIFAAHPNLRAEKIQNIQKIEEIRGTFALYSLLCRHARLCILPNQEPMDDKLSAYDIKGILETRSSAALKSFFRLHPSFRRGFLLFVLFGTCMAIGDGVLTPAISVLSAVSGVKHKIPGLHENYIVLISCVILVGLFSLQHRGTHKVAFMFAPIIMAWLVCISVIGIYNIIKWNPSIYHALSPVYMLKFLRSTGVEGWISLGGVVLSITGARCLWDIVIGVEAMFADLGHFSSLSIKIAFTFLVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVIGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTSMIGHAYGLAVTFVMFVSTCLMTLVIIIVWKLRLINAIAFFMFFGSIELLYISASIIKVHEGGWIPLVLSTIFMCSMYTWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLVAGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHIDEEDRLLVTRVGPKECKMFRCIVRYGYRDLLQENYNFENKLVFSLVHYVETEDQFCKPMTEVSRGCKNSKEPCEYELQLEQAFTSSNKYQAMDTAVDDREKSIYNEEAMHILRAKESGITYIFGHCSVKAKKSSSIFKKLAIDIMYAFLNQNCREQEVLLNVPHTSLLEVGMVYYV 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 594523 599161 - MELO3C020532.2.1 Cme12g00060 343277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00060 719 PANTHER POTASSIUM TRANSPORTER 646 719 - -
Cme12g00060 719 PANTHER POTASSIUM TRANSPORTER 57 613 - -
Cme12g00060 719 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 57 613 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g00060 719 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 646 719 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g00060 719 Pfam K+ potassium transporter 56 572 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g00060 719 TIGRFAM kup: potassium uptake protein 57 719 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g00060 719 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g00060 Cme-Chr12:594523 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme12g00060 Cme-Chr12:594523 Cme04g01908 Cme-Chr4:26778147 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00060 K03549 - csv:101222845 1245.34