Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00155 ATGCTTCTTCTTCTTGGTTTGTTTAGTCTCTTTATCCTCCTCCTTTGCCTCCAATGGAGCCATCCCAAACACAAACTCCTCCCACCCGGCTCCATGGGTTGGCCTTACATCGGCGAAACCTTCAAACTCTACACCCAAAACCCAAACTCCTTCTTTTCCATTAGACAAAAAAGATATGGGGATGTTTTTAAGACACATATATTGGGTTGTCCGTGTGTGATGATTTCAAGTCCAAAGGCTGCAAGAGTAGTGCTTGTGAGTAAAGCTCATTTGTTCAAGCCAACTTATCCACCAAGTAAAGAGAAAATGATCGGTCCTCAAGCTTTGTTTTTCCATCAAGGTCCTTACCATTCTTATCTTAAGAAGTTGATTCAATCTTCCTTTTTGCCATCTGCCATTAAACACTCTATTTCTCAAATTGAGAACATTGTTCTTCACCTTCTCCCCTCTTGGAATAACTCCCAAATCAACACCTTGCAACAAATGAAAAGGTTTGCTTTTGATGTGGCGATGATATCAGCTTTCGGAGATCAACAAGATTTGGAAATTGAGAGAATCAAGCATTTGTACCAATGTCTTGAAAAAGGCTACAATTCTATGCCTCTCGATCTTCCCGGAACGCCTTTCCATAAAGCAATGAAGGCAAGGAAGGTGTTGAGTGAAACATTGGGGAAAATGATAGAGAAGAGACGGCGGAACAAAGAGCATGGAGGTGGGTTGTTGGCGGTGCTACTCAGCGGTGGTGGTGGGGAGGAAGAAGAGAAAAAGAAGCTAAGTGATTCTCAAATAGCAGATAATATAATAGGAGTAATATTTGCAGCACAAGACACAACAGCAAGTGTATTAACATGGATCCTTAAATATTTACATGACAATCACCACCTTCTAGAAGCTGTTAAGAAGGAGCAAGATGCAATTTATGAAAGGAAACTGTGCGAAGGGAAGCGTGGGCTTTCATGGGATGATACAAGGCGCATGCCTTTCACTAGTCGGGTGATCTTAGAAACCCTAAGAAGAGCAAGTGTAGTGTCGTTCACATTTAGAGAAGCAGTAGAAGAAGTTGAATTTGAAGGATATTTAATACCCAAAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTTTTCCCACATCCCCACAACTTTGATCCTTCAAGATTCGAGATTTTATTTATCTAG 1194 41.12 MLLLLGLFSLFILLLCLQWSHPKHKLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPKAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHSYLKKLIQSSFLPSAIKHSISQIENIVLHLLPSWNNSQINTLQQMKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFHKAMKARKVLSETLGKMIEKRRRNKEHGGGLLAVLLSGGGGEEEEKKKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNHHLLEAVKKEQDAIYERKLCEGKRGLSWDDTRRMPFTSRVILETLRRASVVSFTFREAVEEVEFEGYLIPKGWKVLPLFRTIHHSPDFFPHPHNFDPSRFEILFI 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1530762 1533066 - MELO3C035278.2.1 Cme12g00155 343372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00155 397 Gene3D Cytochrome P450 19 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g00155 397 SUPERFAMILY Cytochrome P450 23 392 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g00155 397 PRINTS E-class P450 group IV signature 326 342 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g00155 397 PRINTS E-class P450 group IV signature 50 73 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g00155 397 PRINTS E-class P450 group IV signature 375 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g00155 397 PRINTS E-class P450 group IV signature 264 290 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g00155 397 PANTHER CYTOCHROME P450 26 5 394 - -
Cme12g00155 397 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 5 394 - -
Cme12g00155 397 Pfam Cytochrome P450 28 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01477 Cme-Chr7:20551212 Cme12g00155 Cme-Chr12:1530762 8.96E-160 dispersed
Cme12g00155 Cme-Chr12:1530762 Cme09g00202 Cme-Chr9:1562626 1.75E-63 dispersed
Cme12g00155 Cme-Chr12:1530762 Cme07g00357 Cme-Chr7:2295995 2.16E-153 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00155 K09843 - csv:101216531 738.799