Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00230 ATGGGTAGAGGCGGTGAAAACTACGGGAAAAAAGAGATTTTTGCTGCTAACTCATCCAAGAAAGAAACTTATCCAGCCTGGGCAAGAGATGTTCAAGAATGCTTAGAGATATACCAAGTGAACCCTGATCTTGGATTATCAACTGAAGAGGTTGAAAACAAGAGAAAGATCTATGGTTACAATGAGTTGGAGAAACATGAAGGTACTTCAATCTTTAAACTGATTTTAGAACAATTTAATGACACACTAGTTAGGATTCTATTAGCCGCAGCAGTTGTATCTTTTGTTCTTGCGTGGTATGATGGAGAGGAAGGAGGTGAGATGGAGATCACAGCATTTGTGGAGCCTCTAGTTATTTTCTTGATATTGATTGTTAATGCCATTGTTGGCATTTGGCAAGAGAACAATGCCGAGAAAGCATTGGAAGCTCTTAAAGAAATTCAGTCTGAACAGGCTTCAGTGTTACGAAATGGTAAACGAACTTCAATTGTTGCAAAAGAACTTGTTCCTGGTGATATAGTAGAACTGAGAGTTGGGGATAAGGTGCCTGCTGACATGAGAGTATTGCGTTTAATCAGCTCTACTTTTCGAGTTGAGCAAGGTTCCTTGACAGGTGAGAGTGAAGCAGTGAGCAAGACATCTAAGACTGTGCCAGAAGATACAGATATACAGGGGAAAAAGTGTATGGTTTTTGCAGGGACAACAGTTGTAAATGGGAATTGTATTTGCATTGTTACCCAAACAGGAATGAGCACTGAACTCGGACAGGTGCATTGTCAGATACAAGAAGCAGCCCAGAGTGAAGATGATACACCATTGAAGAAGAAGTTGAATGAGTTTGGAGAGCTTTTAACAGCAATAATTGGAGTGATCTGTGCTCTAGTCTGGCTTATTAATGTCAAATACTTCCTCACTTGGGAATACGTCGATGGTTGGCCTGCAAATTTTAAGTTTTCGTTTGAGAAATGTACATATTACTTTGAGATTGCTGTGGCTTTGGCTGTGGCAGCAATTCCTGAAGGTTTGCCTGCGGTCATAACAACATGCTTGGCACTTGGCACTAGGAAGATGGCCCAAAAAAATGCCCTTGTTCGTAAGCTGCCCAGTGTTGAAACACTTGGCTGTACAACTGTGATATGTTCTGATAAGACAGGTACTCTAACGACTAATCAGATGGCTGTGGCGAAAATTGTGGCTCTTGGTTCTCGTGTTGGTACTCTACGAGCCTTTGATGTGGAGGGGACGACATATGATCCTTTGGATGGAAAAATAATTGGTTGGCTTGAAGGTCAACTGGATGCTAATCTGCAAATGTTGGCAAAGATTGCTGCCGTTTGTAATGATGCAGGTGTTGAAAAATCTGGCCATCATTTTGTTGCAAGTGGAATGCCTACTGAAGCAGCTCTGAAGGTTCTTGTGGAAAAGATGGGGCTTCCTGAAGGATATGACTCAAGTTCAGTTGAAACTAATGGGGATGTCCTGCGATGCTGCCAAGCTTGGAACAAGAATGAGCAGCGCATTGCTACTTTGGAGTTTGACCGGGACCGTAAATCCATGGGAGTTATCACAAATTCTAAATCAGGGAAGAAATCATTACTCGTGAAGGGTGCTGTTGAAAATCTTCTGGATCGGAGTTCATTTATTCAGCTGCTTGATGGAACTATAGTGAATTTGGACTCAGACTCGAAGAAATATCTCTTAGATTGTTTGCGTGAGATGTCTTCTAGTGCACTAAGGTGTTTAGGTTTTGCATACAAGGAATATCTTCCAGAATTTTCTGACTATACCGTTGGTGATGAAGATCATCCAGCACATCAGCTTCTACTTGACCCATCCAAATACTCTACAATTGAAAGCAATCTTATTTTTGCTGGATTTGTTGGGTTAAGGGATCCTCCTCGAAAAGAGGTTCATCAAGCAATTGAAGACTGTAAAGCTGCTGGTATTCGCGTCATGGTTATCACAGGAGACAACCAGAACACAGCTGAAGCTATATGTCGAGAAATAGGTGTATTTGGACAACATGAAGCTATAAATTCCAGAAGTTTAACTGGTAAACAATTCATGACAATGAGCCGGGAGGATCAGAAATTTCATCTAAGACAAGATGGAGGACTTCTTTTCTCTAGGGCTGAACCAAGACATAAACAAGAGATAGTAAGATTGCTCAAGGAAGATGGTGAAGTTGTTGCAATGACAGGAGATGGAGTCAATGATGCACCTGCCTTGAAGTTGGCTGATATTGGGATTGCGATGGGCATTGCTGGGACAGAGGTTGCAAAGGAAGCCTCTGATATGGTTCTTGCCGATGACAATTTTAGTACCATAGTCGCTGCAGTTGGTGAAGGAAGATCAATTTACGACAACATGAAGGCTTTTATCAGGTACATGATTTCCTCGAACATCGGTGAGGTTGCATCGATATTTTTGACAGCAGCACTGGGTATTCCCGAAGGGATGATCCCTGTTCAGCTTCTCTGGGTTAATCTTGTTACAGATGGACCCCCAGCAACTGCATTAGGATTTAATCCACCTGATAACGATATAATGAAGAAACCGCCAAGGAAAAGTGATGACTCGTTGATCACAACCTGGATTTTGATCCGCTATTTGGTGATTGGACTCTACGTAGGGTTAGCAACTGTAGGCGTTTTTATTATTTGGTACACACATGGTTCATTCTTGGGCATTGACCTGTCTGGAGATGGTCACAGTCTCGTCTCTTACTCTCAGCTTGCCAACTGGGGTCAGTGTCCGTCTTGGGAAGGATTCTCCGTGTCACCCTTCACAGCAGGGGATGAAGTCTTCAACTTCGATTCAGATCCATGCGAGTACTTCCGCTCAGGCAAGATCAAGGCATCAACCCTCTCACTTTCTGTTCTGGTCGCCATCGAGATGTTCAATTCCCTCAATGCCCTCTCCGAGGATGGTAGCTTGTTGACAATGCCCCCTTGGGTTAACCCCTGGCTCCTCCTTGCAATGTCAGTTTCATTCGGCTTGCATTTCTTGATTCTGTATGTGCCATTCCTTGCCAAGATTTTCGGCATTGTCCCGCTGTCCTTGAACGAATGGCTCTTGGTTCTAGCTGTGGCATTGCCCGTAATCATAATTGATGAGATTCTGAAATTCATTGGAAGACTCACGAGTGGTTTGAGGACTTCTCGCCCGAGCAGATCATCGAAGCAGAAATCAGAGTGA 3198 43.09 MGRGGENYGKKEIFAANSSKKETYPAWARDVQECLEIYQVNPDLGLSTEEVENKRKIYGYNELEKHEGTSIFKLILEQFNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQENNAEKALEALKEIQSEQASVLRNGKRTSIVAKELVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTSKTVPEDTDIQGKKCMVFAGTTVVNGNCICIVTQTGMSTELGQVHCQIQEAAQSEDDTPLKKKLNEFGELLTAIIGVICALVWLINVKYFLTWEYVDGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDPLDGKIIGWLEGQLDANLQMLAKIAAVCNDAGVEKSGHHFVASGMPTEAALKVLVEKMGLPEGYDSSSVETNGDVLRCCQAWNKNEQRIATLEFDRDRKSMGVITNSKSGKKSLLVKGAVENLLDRSSFIQLLDGTIVNLDSDSKKYLLDCLREMSSSALRCLGFAYKEYLPEFSDYTVGDEDHPAHQLLLDPSKYSTIESNLIFAGFVGLRDPPRKEVHQAIEDCKAAGIRVMVITGDNQNTAEAICREIGVFGQHEAINSRSLTGKQFMTMSREDQKFHLRQDGGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDNDIMKKPPRKSDDSLITTWILIRYLVIGLYVGLATVGVFIIWYTHGSFLGIDLSGDGHSLVSYSQLANWGQCPSWEGFSVSPFTAGDEVFNFDSDPCEYFRSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAKIFGIVPLSLNEWLLVLAVALPVIIIDEILKFIGRLTSGLRTSRPSRSSKQKSE 1065
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2597422 2603610 + MELO3C020683.2.1 Cme12g00230 343447

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00230 1065 Gene3D - 45 262 - -
Cme12g00230 1065 Pfam haloacid dehalogenase-like hydrolase 377 747 - -
Cme12g00230 1065 SUPERFAMILY Calcium ATPase, transmembrane domain M 25 1046 IPR023298 -
Cme12g00230 1065 SMART Cation_ATPase_N_a_2 25 99 IPR004014 -
Cme12g00230 1065 PANTHER CALCIUM-TRANSPORTING ATPASE 4 1064 - -
Cme12g00230 1065 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 4 1064 - -
Cme12g00230 1065 SUPERFAMILY HAD-like 378 837 IPR036412 -
Cme12g00230 1065 Pfam E1-E2 ATPase 147 360 - -
Cme12g00230 1065 Gene3D - 377 778 IPR023214 -
Cme12g00230 1065 SFLD C1.7: P-type atpase like 361 785 - -
Cme12g00230 1065 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 387 629 IPR023299 GO:0000166
Cme12g00230 1065 Pfam Cation transporting ATPase, C-terminus 818 1044 IPR006068 -
Cme12g00230 1065 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Cme12g00230 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 319 401 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme12g00230 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 118 307 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme12g00230 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 707 817 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cme12g00230 1065 Gene3D - 77 1046 - -
Cme12g00230 1065 SUPERFAMILY Calcium ATPase, transduction domain A 149 257 IPR008250 -
Cme12g00230 1065 SFLD p-type atpase 361 785 IPR044492 -
Cme12g00230 1065 PRINTS P-type cation-transporting ATPase superfamily signature 199 213 - -
Cme12g00230 1065 PRINTS P-type cation-transporting ATPase superfamily signature 380 394 - -
Cme12g00230 1065 PRINTS P-type cation-transporting ATPase superfamily signature 625 636 - -
Cme12g00230 1065 PRINTS P-type cation-transporting ATPase superfamily signature 647 657 - -
Cme12g00230 1065 PRINTS P-type cation-transporting ATPase superfamily signature 733 752 - -
Cme12g00230 1065 PRINTS P-type cation-transporting ATPase superfamily signature 757 769 - -
Cme12g00230 1065 ProSitePatterns E1-E2 ATPases phosphorylation site. 382 388 IPR018303 -
Cme12g00230 1065 Gene3D - 390 632 IPR023299 GO:0000166
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00230 K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] - csv:101206729 2055.03
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme03g02114 Cme-Chr3:28374166 Cme12g00230 Cme-Chr12:2597422 4.72E-07 dispersed
Cme09g01069 Cme-Chr9:14953029 Cme12g00230 Cme-Chr12:2597422 6.76E-95 dispersed
Cme12g00230 Cme-Chr12:2597422 Cme05g01855 Cme-Chr5:27319766 1.74E-60 dispersed
Cme12g00230 Cme-Chr12:2597422 Cme08g00653 Cme-Chr8:4271327 3.60E-77 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi6g367 . . Bda02g00797 Bda09g01488 Bpe01g00156 . . . Cmo13g00152 . Cma01g00579 Cma13g00147 Car01g00528 Car13g00117 Sed01g1060 . Cpe20g00800 Bhi08g00646 Tan01g2494 Cmetu12g0878 . Hepe10g1192 . Lcy11g0222 . . . . . . . Cone1ag0679 . Cone18ag0318 Cone11ag1268 Lsi02g01380 . . . Blo13g01094 Blo14g00140 . . Bpe08g00127 . Bma07g00120 Bma11g00140 . . . . . . . . . . . . . . . . Cla03g00170 Cam03g0179 Cec03g0176 Cco03g0186 Clacu03g0182 Cmu03g0800 Cre03g0492 . Csa01g02374 Chy12g00153 Cme12g00230
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cme11g01758 . 73 886 Primary Pumps ATPases(2) AT2G28520 81.3 0.0e+00 1342.4
Cme01g01362 . 70 873 Primary Pumps ATPases(2) AT2G28520 63.2 1.6e-294 1008.8
Cme03g01909 . 2 519 Primary Pumps ATPases(2) AT2G28520 69.3 4.2e-215 745.0
Cme01g01362 . 66 878 Primary Pumps ATPases(2) AT2G21410 75.8 0.0e+00 1234.2
Cme11g01758 . 81 890 Primary Pumps ATPases(2) AT2G21410 62.5 2.3e-298 1021.5
Cme03g01909 . 9 524 Primary Pumps ATPases(2) AT2G21410 76.9 1.2e-238 823.2
Cme01g01362 . 68 878 Primary Pumps ATPases(2) AT4G39080 77.1 0.0e+00 1240.3
Cme11g01758 . 81 890 Primary Pumps ATPases(2) AT4G39080 63.4 2.6e-297 1018.1
Cme03g01909 . 9 524 Primary Pumps ATPases(2) AT4G39080 77.8 1.6e-238 822.8
Cme03g01900 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.4e-60 229.2
Cme06g00383 . 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 1.9e-38 155.6
Cme06g00382 . 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 1.9e-38 155.6
Cme03g01900 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.4e-66 249.6
Cme06g00383 . 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 5.2e-50 194.5
Cme06g00382 . 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 5.2e-50 194.5
Cme03g01900 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 4.2e-74 274.2
Cme06g00383 . 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 6.0e-52 200.7
Cme06g00382 . 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 6.0e-52 200.7
Cme06g00383 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 3.1e-53 204.5
Cme06g00382 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 3.1e-53 204.5
Cme03g01900 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.2e-52 202.6
Cme03g01656 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.7 2.3e-70 262.3
Cme04g00385 . 7 160 Primary Pumps ATPases(2) AT2G25610 83.8 5.7e-61 231.1
Cme03g01900 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 3.8e-60 227.6
Cme06g00383 . 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 5.4e-38 154.1
Cme06g00382 . 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 5.4e-38 154.1
Cme03g01656 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 1.9e-71 265.8
Cme04g00385 . 1 160 Primary Pumps ATPases(2) AT4G32530 73.7 8.7e-64 240.4
Cme12g00230 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.2 0.0e+00 1666.0
Cme12g00230 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.2 0.0e+00 1669.8
Cme12g00230 . 22 1046 Primary Pumps ATPases(2) AT4G00900 65.8 0.0e+00 1319.7
Cme02g00511 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.9 1.3e-57 219.2
Cme01g01238 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 4.3e-268 920.2
Cme04g02533 . 2 109 Primary Pumps ATPases(2) AT3G01390 79.6 3.6e-37 151.0
Cme09g01067 . 1 376 Primary Pumps ATPases(2) AT1G12840 83.0 5.3e-181 630.6
Cme05g00306 . 63 323 Primary Pumps ATPases(2) AT3G58730 81.6 8.4e-117 416.8
Cme04g02122 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.2
Cme03g01900 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 4.2e-74 274.2
Cme06g00383 . 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 6.0e-52 200.7
Cme06g00382 . 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 6.0e-52 200.7
Cme01g01238 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.7 1.1e-269 925.6
Cme06g01749 . 1 176 Primary Pumps ATPases(2) AT1G64200 77.0 6.5e-66 247.3
Cme01g01238 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 9.1e-266 912.5
Cme11g01758 . 73 886 Primary Pumps ATPases(2) AT2G28520 81.3 0.0e+00 1342.4
Cme01g01362 . 70 873 Primary Pumps ATPases(2) AT2G28520 63.2 1.6e-294 1008.8
Cme03g01909 . 2 519 Primary Pumps ATPases(2) AT2G28520 69.3 4.2e-215 745.0
Cme04g01965 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 6.1e-192 666.8
Cme06g01749 . 1 229 Primary Pumps ATPases(2) AT4G11150 77.4 7.7e-90 327.0
Cme01g02735 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.1 0.0e+00 1172.1
Cme01g01238 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 4.3e-268 920.2
Cme01g01238 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.7 1.1e-269 925.6
Cme01g01238 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 9.1e-266 912.5
Cme09g01067 . 1 376 Primary Pumps ATPases(2) AT1G12840 83.0 5.3e-181 630.6
Cme05g00306 . 63 323 Primary Pumps ATPases(2) AT3G58730 81.6 8.4e-117 416.8
Cme06g01749 . 1 229 Primary Pumps ATPases(2) AT4G11150 77.4 7.7e-90 327.0
Cme06g01749 . 1 223 Primary Pumps ATPases(2) AT3G08560 69.5 6.5e-76 280.8
Cme06g01749 . 1 176 Primary Pumps ATPases(2) AT1G64200 77.0 6.5e-66 247.3
Cme02g00511 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.9 1.3e-57 219.2
Cme04g02533 . 2 109 Primary Pumps ATPases(2) AT3G01390 79.6 3.6e-37 151.0
Cme04g02122 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.2
Cme11g01758 . 73 886 Primary Pumps ATPases(2) AT2G28520 81.3 0.0e+00 1342.4
Cme01g01362 . 70 873 Primary Pumps ATPases(2) AT2G28520 63.2 1.6e-294 1008.8
Cme03g01909 . 2 519 Primary Pumps ATPases(2) AT2G28520 69.3 4.2e-215 745.0
Cme01g01362 . 66 878 Primary Pumps ATPases(2) AT2G21410 75.8 0.0e+00 1234.2
Cme11g01758 . 81 890 Primary Pumps ATPases(2) AT2G21410 62.5 2.3e-298 1021.5
Cme03g01909 . 9 524 Primary Pumps ATPases(2) AT2G21410 76.9 1.2e-238 823.2
Cme01g01362 . 68 878 Primary Pumps ATPases(2) AT4G39080 77.1 0.0e+00 1240.3
Cme11g01758 . 81 890 Primary Pumps ATPases(2) AT4G39080 63.4 2.6e-297 1018.1
Cme03g01909 . 9 524 Primary Pumps ATPases(2) AT4G39080 77.8 1.6e-238 822.8
Cme03g01900 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 1.4e-60 229.2
Cme06g00383 . 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 1.9e-38 155.6
Cme06g00382 . 28 122 Primary Pumps ATPases(2) AT4G34720 98.9 1.9e-38 155.6
Cme06g00383 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 3.1e-53 204.5
Cme06g00382 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 3.1e-53 204.5
Cme03g01900 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.2e-52 202.6
Cme03g01900 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 3.8e-60 227.6
Cme06g00383 . 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 5.4e-38 154.1
Cme06g00382 . 28 122 Primary Pumps ATPases(2) AT4G38920 98.9 5.4e-38 154.1
Cme03g01900 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 1.4e-66 249.6
Cme06g00383 . 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 5.2e-50 194.5
Cme06g00382 . 2 122 Primary Pumps ATPases(2) AT1G75630 96.7 5.2e-50 194.5
Cme03g01900 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 4.2e-74 274.2
Cme06g00383 . 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 6.0e-52 200.7
Cme06g00382 . 3 122 Primary Pumps ATPases(2) AT2G16510 99.2 6.0e-52 200.7
Cme03g01656 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 1.9e-71 265.8
Cme04g00385 . 1 160 Primary Pumps ATPases(2) AT4G32530 73.7 8.7e-64 240.4
Cme03g01656 . 4 180 Primary Pumps ATPases(2) AT2G25610 84.7 2.3e-70 262.3
Cme04g00385 . 7 160 Primary Pumps ATPases(2) AT2G25610 83.8 5.7e-61 231.1
Cme04g01965 . 1 351 Primary Pumps ATPases(2) AT3G28710 94.3 5.3e-199 690.3
Cme04g01965 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 6.1e-192 666.8
Cme12g00230 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.2 0.0e+00 1666.0
Cme12g00230 . 22 1046 Primary Pumps ATPases(2) AT4G00900 65.8 0.0e+00 1319.7
Cme12g00230 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.2 0.0e+00 1669.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004869 2 1 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 3 1 2 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cme12g00230 Cme_Chr12 FPKM 18.005077 20.275017 5.434877 5.966784 1.499364 1.238592 1.229774 0.474238 0.495741 0.571278