Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme12g00306 | ATGGCGGGGGCAGCCGGTGGGAAGTCGCTCGAGCAAACACCGACATGGGCCGTTGCCGTTGTTTGCTTTGTTTTGCTCGTCGTCTCTATTTTCATCGAATATAGTCTCCATCTTATCGGACATTGGCTAAAGAAGAGACACAAACGGGCGTTATTTGAAGCATTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTTATATCATTGCTACTGACGGTGGGGCAAGGACCAATAACGGAGATATGTATTCCACAACATGTAGCTGCAACCTGGCATCCATGTACAAAGGAAAGAGAAGATGAGATGAACAAAGAGATGGAGAAATCTGTGCAACATTTGGGTCATAATCGCCGGAGACTCCTTCATCTCGTCGGAAATGGTGGAAGTTTCCGGCGGAGTTTGGCCGCTGCGGGAGGAGCTGATAAATGTGCTGCCAAGGGTAAAGCTTCATTTATCTCAGCAGAAGGAATTCATCAACTTCATATCTTCATTTTTGTGTTGGCTGTTTTCCATGTTTTGTATTGTGTTCTAACTTATGCTTTGGCTAGAGCTAAGATGAGGAGTTGGAAAACATGGGAAAAAGAGACCAAAACTGCTGAATACCAATTCTCACATGATCCGGAGAGATTTAGGTTTGCAAGAGACACCTCATTTGGGAGAAGACATTTGAGCTTTTGGACCAAAAATCCTGCCTTCATGTGGATCGTTTGTTTCTTCAGACAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTAAGACATGGGTTTATAATGGCACATTTAGCACCTCAAAGTCATACACAATTCGATTTTCAAAAATACATTAATAGATCCCTTGAAGAAGACTTCAAAGTTGTTGTGGGAATCAGCCCACCAATTTGGTTCTTTGCTGTTCTATTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTTCCATTCATCCCACTAATCATTTTGCTGTTGGTTGGAACAAAATTGCAAGTGATCATAACGAAAATGGCACTAAGAATACAAGAAAGAGGAGAAGTAGTGAAGGGCGTGCCGGTGGTGGAGCCTGGGGATGACCTTTTTTGGTTTAATCGACCTCGTCTTATTCTTTATCTCATCAACTTTGTTCTCTTTCAAAATGCCTTCCAAGTTGCTTTCTTTGCTTGGACTTGGTATGAGTTTGGGTTGAATTCTTGTTTCCACGAGCATATAGAGGATGTGGTGATCAGAATTTCCATGGGGGTGCTTGTACAAATCCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTAGTCACTCAGATGGGTTCAACAATGAAGCCAACTATATTCAACGAGAGAGTGGCAGAGGCCCTTCGCAATTGGTACCACTCGGCTCGAAAGCACATCAAACACAACCGCGGTTCGGTCACTCCAATGTCGAGCCGACCCGCCACCCCGACTCACAGCATGTCACCTGTCCACCTTCTCCGACACTACAAGAGTGAAGTCGATAGCTTCCACACCTCACCGAGAAGGTTCGACACCGACCGTTGGGACAATGATTCGCCCTCACCGTCTCGCCATGTTGATGGTTCGTCTTCCTCACAACCCCATGTCGAGATGGGAGGTTATGAAAAAGATCCCGTTGATTCAAGTTCGTCTCAAGTTGACCCGATTCAACCATCCCGAAACCGCAATCAACATGAGATTCATATTGGGGGCCCCAAAGACTTTTCATTTGATAGAGTTGAATGA | 1743 | 44.23 | MAGAAGGKSLEQTPTWAVAVVCFVLLVVSIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEREDEMNKEMEKSVQHLGHNRRRLLHLVGNGGSFRRSLAAAGGADKCAAKGKASFISAEGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPAFMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLVGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHIEDVVIRISMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVAEALRNWYHSARKHIKHNRGSVTPMSSRPATPTHSMSPVHLLRHYKSEVDSFHTSPRRFDTDRWDNDSPSPSRHVDGSSSSQPHVEMGGYEKDPVDSSSSQVDPIQPSRNRNQHEIHIGGPKDFSFDRVE | 580 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 3967524 | 3974371 | - | MELO3C005044.2.1 | Cme12g00306 | 343523 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme12g00306 | 580 | MobiDBLite | consensus disorder prediction | 565 | 580 | - | - | |
| Cme12g00306 | 580 | MobiDBLite | consensus disorder prediction | 467 | 486 | - | - | |
| Cme12g00306 | 580 | PANTHER | MLO-LIKE PROTEIN 1 | 1 | 577 | IPR004326 | GO:0006952|GO:0016021 | |
| Cme12g00306 | 580 | PANTHER | MLO-LIKE PROTEIN | 1 | 577 | - | - | |
| Cme12g00306 | 580 | MobiDBLite | consensus disorder prediction | 521 | 535 | - | - | |
| Cme12g00306 | 580 | MobiDBLite | consensus disorder prediction | 503 | 580 | - | - | |
| Cme12g00306 | 580 | Pfam | Mlo family | 8 | 495 | IPR004326 | GO:0006952|GO:0016021 | |
| Cme12g00306 | 580 | MobiDBLite | consensus disorder prediction | 503 | 520 | - | - | |
| Cme12g00306 | 580 | MobiDBLite | consensus disorder prediction | 470 | 484 | - | - | |
| Cme12g00306 | 580 | MobiDBLite | consensus disorder prediction | 544 | 563 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme03g01333 | Cme-Chr3:22883415 | Cme12g00306 | Cme-Chr12:3967524 | 2.59E-154 | dispersed | |
| Cme08g00265 | Cme-Chr8:1713766 | Cme12g00306 | Cme-Chr12:3967524 | 7.86E-159 | dispersed | |
| Cme08g01000 | Cme-Chr8:6523121 | Cme12g00306 | Cme-Chr12:3967524 | 5.21E-160 | dispersed | |
| Cme10g00061 | Cme-Chr10:463879 | Cme12g00306 | Cme-Chr12:3967524 | 0 | dispersed | |
| Cme11g00865 | Cme-Chr11:11566380 | Cme12g00306 | Cme-Chr12:3967524 | 1.16E-42 | dispersed | |
| Cme11g02497 | Cme-Chr11:31537758 | Cme12g00306 | Cme-Chr12:3967524 | 8.85E-95 | dispersed | |
| Cme12g00306 | Cme-Chr12:3967524 | Cme12g00310 | Cme-Chr12:4097788 | 4.85E-170 | proximal | |
| Cme06g01218 | Cme-Chr6:9850093 | Cme12g00306 | Cme-Chr12:3967524 | 2.35E-111 | transposed | |
| Cme06g02377 | Cme-Chr6:30988474 | Cme12g00306 | Cme-Chr12:3967524 | 8.16E-42 | transposed | |
| Cme09g00335 | Cme-Chr9:2854788 | Cme12g00306 | Cme-Chr12:3967524 | 1.83E-103 | transposed | |
| Cme11g00033 | Cme-Chr11:337486 | Cme12g00306 | Cme-Chr12:3967524 | 6.46E-62 | transposed | |
| Cme11g00866 | Cme-Chr11:11571938 | Cme12g00306 | Cme-Chr12:3967524 | 7.73E-15 | transposed | |
| Cme11g02498 | Cme-Chr11:31543434 | Cme12g00306 | Cme-Chr12:3967524 | 1.75E-28 | transposed | |
| Cme11g01786 | Cme-Chr11:26042054 | Cme12g00306 | Cme-Chr12:3967524 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme12g00306 | K08472 | - | csv:101217225 | 1122.84 |