Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cme12g00352 | ATGATCATTGGGATTGGTTCAAGCTTTACAGCCATTGATAACCTTGCCCAAATTGGTGAATCTCATGGCTACTCAACTGAATCCATCGATTTAATCATTTCCATTGTTAGTATTTTCAACTTCTTCGGTCGAATCTTTTCCGGGTTCGCTTCGGAAATCTTGTTAGAGAAATTCAAATTCCCTAGACCATTGATGCTAACTTTCACTCTTTTGATCTCCTGTATTGGACATATCTTAGTAGCATTTCCTTTCCATCATTCACTCTACATTGCATCAGTCATAATTGGGTTTTGTTTAGGTTCGCAAATCCCGTTGTATTTCGCTATGATTTCGGAGATTTTCGGTCTCAAACATTACTCTTTGTTGTATAATTTTGGGCAACTGTCTTGTCCCGTAGGGAGTTATGTATTGAATGTGTTAGTGGCTGGGAGATTCTATGATGAAGAAGCTAAAATGGTTGGTAATAATTCAATTGGTTTTACATGTAAAGGGGAATTGTGTTATCGAAATTCTTTTGCTATTTTGACTGGGATGTCATTGTTGGGAGCTGTGATTTCATTGATTTTGGTGAAGAGAACAAATGAGTTCTATAGTGGAGACATATACAAGAAATTTAGAGAAGATATGGATTCATTGAAGACTGAAGTCGAACTTTATACAATTGATACTAAGATTGAAAGTGATAGTGTCAATGTTGGTAGCCAAAGTACTGATACCTCCATGTGA | 726 | 36.36 | MIIGIGSSFTAIDNLAQIGESHGYSTESIDLIISIVSIFNFFGRIFSGFASEILLEKFKFPRPLMLTFTLLISCIGHILVAFPFHHSLYIASVIIGFCLGSQIPLYFAMISEIFGLKHYSLLYNFGQLSCPVGSYVLNVLVAGRFYDEEAKMVGNNSIGFTCKGELCYRNSFAILTGMSLLGAVISLILVKRTNEFYSGDIYKKFREDMDSLKTEVELYTIDTKIESDSVNVGSQSTDTSM | 241 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 4878170 | 4878895 | + | MELO3C035446.2.1 | Cme12g00352 | 343569 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cme12g00352 | 241 | Gene3D | MFS general substrate transporter like domains | 1 | 198 | IPR036259 | - | |
| Cme12g00352 | 241 | Coils | Coil | 202 | 222 | - | - | |
| Cme12g00352 | 241 | PANTHER | PROTEIN NUCLEAR FUSION DEFECTIVE 4 | 1 | 213 | - | - | |
| Cme12g00352 | 241 | Pfam | Major Facilitator Superfamily | 14 | 192 | IPR011701 | GO:0022857|GO:0055085 | |
| Cme12g00352 | 241 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 1 | 213 | - | - | |
| Cme12g00352 | 241 | SUPERFAMILY | MFS general substrate transporter | 5 | 194 | IPR036259 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cme12g00352 | Cme-Chr12:4878170 | Cme12g00360 | Cme-Chr12:4969378 | 1.27E-80 | dispersed | |
| Cme12g00349 | Cme-Chr12:4837076 | Cme12g00352 | Cme-Chr12:4878170 | 1.18E-101 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cme12g00352 | - | - | csv:101203173 | 423.705 |