Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00357 ATGGGAACTAAAGCTTGGGATTACACAAAACAAGTCATACAAGGACGATGGTTTTCGGTATTCGCCGGTTTGATAATGATGGTTGGCAATGGCTCTACTTACATCTATGGAACATATTCAAAAGTAATCAAGACTGAATTCAATTACAGTCAAACCCAACTTAGCATATTAGGATTTGCAAAAGATCTCGGTTCCAACGTTGGAATTTTTGCCGGTCTTCTCGCCGAAGTCGCTCCGCCGTGGGTTCTCTTCTTAATTGGTTCTGTTCAAAACTTCACTGGCTTCTTCTTGATATGGCTCTCTATCACACACCGTATCCCACAACCAAAATTTTGGCAAATGTTTCTTTGTGTTTGCTTAGGTACTCATTCTTCTAATTTTGCCAATACAGCCATTATGGTCACTAGTGTTGTAAATTTCCCTGACCGTCGTGGTATCATTTTAGGCTTACTCAATGGGTATGTTGGTATTGGAGGTGCCATTTTAACCCAAATCTATTTAGGTATTTACGGCCCTAAAGATCCATCAAATCTTGTTCTTCTTTTTGCTTGGCTTCCCTCTGCGGTAATCCTCGTTCTTTCTTTCTCTATTCGACCAATCTGTATTCATAAACATCCTGAAGAACTCAAAGTGTTTTACCACTTGCTTTATGTCTCTGTTATTCTAGCTATGTTCATTCTCTTTTTAACCATTGCACAAAAAGAAGTAGCTTTCACTCGACGTGGATATACGAATGGTGCGGCCGTCATCGTTGTGTTACTATTCCTACCTCTTGTGATTGTATGTAGAGAAGAACACGTATTGTACAAACTCAACAAACAAAACGAGGATTCTTCCTTTAATATCTCGATTAATGATCATCAAAAGCCTCATAGCTCAATCACCACAGAAAAAACAGAGAACTCGCGGTCGTATTTCTCAAAAATATGGAACAAACCCGAAAGAGGAGAAGATTTCAGCATCTTGCAAGCTATTTTCAGTATAGATATGACTCTTATCTTTTTAGCTACTTTTTCTGGATCTGGTTCTGCTCTTACAGCCATTGATAATTTAGGCCAAGTCGCTGAATCACTTGCCTACCCGTCAGAAGCTATAAGCATCATCGTTTCTTGGGTTTCCGTATTCAATTTCTTCGGTCGAATCTTCTCCGGTTTCATCTCCGAAAACTTCATGATCAAATACAAATTACCTCGTCCTCTAACGTTTGCTGTCGCCTTCTTCATCACTGGCATTGGCCAGCTTATTGTTGCGTATCCATCATCAGGTTCAGTCTTCATTGCTTCAATCGTAATCGGGTTCGGATTTGGAATGCAAGTGCCATTGCTATTCACCATAATCTCAGAGCTATTTGGGCTAAAACATTACTCAACATTGTTCAATTGTGGGCAACTGGTAGTCCCAATTGGGTCTTATATACTAAACGTGGATGTAGTAGGGAGAATATATGATAAAGAAGCATTAGTTGACGGTATAAAGTTGACGGGCAGGGGATTAATTTGCACCGGAGCTCATTGTTTTAATGGATCTTTCACAATTTTGTCTGGAGCGACATTGTTTGGTGCTATAGTTATGCTTGCATTGGCTTATAGGACAAGAGAATTCTACAAAGGAGATGTATATAAGAAATATAGAGACGACGTGTGGATTACTCCAACTGATATGGAGTTCTATCACTTAGATAAGAAGAAAATTCGTGATTAA 1701 39.27 MGTKAWDYTKQVIQGRWFSVFAGLIMMVGNGSTYIYGTYSKVIKTEFNYSQTQLSILGFAKDLGSNVGIFAGLLAEVAPPWVLFLIGSVQNFTGFFLIWLSITHRIPQPKFWQMFLCVCLGTHSSNFANTAIMVTSVVNFPDRRGIILGLLNGYVGIGGAILTQIYLGIYGPKDPSNLVLLFAWLPSAVILVLSFSIRPICIHKHPEELKVFYHLLYVSVILAMFILFLTIAQKEVAFTRRGYTNGAAVIVVLLFLPLVIVCREEHVLYKLNKQNEDSSFNISINDHQKPHSSITTEKTENSRSYFSKIWNKPERGEDFSILQAIFSIDMTLIFLATFSGSGSALTAIDNLGQVAESLAYPSEAISIIVSWVSVFNFFGRIFSGFISENFMIKYKLPRPLTFAVAFFITGIGQLIVAYPSSGSVFIASIVIGFGFGMQVPLLFTIISELFGLKHYSTLFNCGQLVVPIGSYILNVDVVGRIYDKEALVDGIKLTGRGLICTGAHCFNGSFTILSGATLFGAIVMLALAYRTREFYKGDVYKKYRDDVWITPTDMEFYHLDKKKIRD 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4920273 4921973 + MELO3C004985.2.1 Cme12g00357 343574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00357 566 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 3 546 - -
Cme12g00357 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 546 - -
Cme12g00357 566 Pfam Nodulin-like 16 261 IPR010658 -
Cme12g00357 566 SUPERFAMILY MFS general substrate transporter 19 535 IPR036259 -
Cme12g00357 566 Gene3D MFS general substrate transporter like domains 324 536 IPR036259 -
Cme12g00357 566 Gene3D MFS general substrate transporter like domains 13 211 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g00357 Cme-Chr12:4920273 Cme12g00361 Cme-Chr12:4993356 0 dispersed
Cme12g00357 Cme-Chr12:4920273 Cme12g00360 Cme-Chr12:4969378 8.01E-77 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00357 - - bhj:120083912 884.019