Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00361 ATGGCCGTCAATAACTTTCTCCCTTTCGTCAAACAACTCACAGCAGGACGATGGTTTTCAGTCTTTGCTTCCTTCTTAATCATGATCGGCGCCGGTTCCACATACGTTTTCGGTACATACTCAAAAGTAATCAAAACCCAATTCAATTACAGCCAAACCGAAATCAACACATTAGGATTCGCCAAAGATCTTGGTTCCAATCTCGGAGTTTTCGCTGGCTTTCTCGGCGAAATAGCTCCACCGTGGGTTCTGTTAGTCGTCGGTGCATTTCTCAATTTCTATAGCTATTTCATGATTTGGCTCTCCGTTACTCGCCGTATCGCTAAACCACAGTTATGGCAAATGTTCTTCTATATTTGCTTAGCTGCTAATTCACAAAACTTCGCTAACACCGCCGTTTTAGTAACGAGTGTAAGAAATTTCCCTGATCGACGAGGTATCATTCTTGGACTTCTTAAAGGATTCGTAGGAATTGGAGGTGCCATTTTAACTCAATTCTTTTTAGCTCTTTATGGCCATGAAAATCCATCTAATTTGGTGCTTCTTCTCTCATGGTTTCCCACTTTAATTTCTTTGGCATTTTTTCTTTCGATTCGAACAATCAATATTCGTAGACATCCCGAAGAACTCCGAGTTCTTTACCATTTGCTATATGTCTCAATCATTCTTGCTTTGTTTCTCTTATTTCTTACCATTACACAAAAACAAGCTGCATTTTCTTCAGCTGGGTATACTAGTGGAGCTGCTGTAATTGTTGGGTTACTTTCTATTCCTCTATTAATCGCCGTTAGAGAAGAACTCATGCTCTTCAAGCTCAAAGGACAAACAGATAATAACCCATCTCCCCCTGTTTTCATTCCGGAAATGAAATCTTCATCTAATTCTACACCCAAAAACAACGAATCCTTAACCCCAATTGAAGAAATTCCCGAAACGAACTCACCAACTTGTCTCTCAAACGTATTCAACAAACCAGAACGTGGAGAAGATTTCACCATCTTACAAGCTCTGTTTAGTAAAGACATGGGGCTTATTCTCGTAGGAACACTTTTTGGGTGTGGTTCATCAATTGCTGCCATTGATAACATCGGCCAAATCGGCGAATCGCTTGGATATACATCTAAATCGATAAGTATCTTTGTTTCGTGGGTTTCAATATTCAATTTCTTCGGCAGAGTAGGCTCTGGTTTCATCTCGGAAACACTTATGACAAAATACAAATTACCTCGTCCTTTAATGTTTGCTTGCGCCCATTTTTTCACTTGTATCGGTATGCTCTTCGTCGCCTTCCCGTATCCCGGCTCCATCTATGGAGCTTCGTTGATAATCGGGTTTGGATTCGGAGCGCAAGTACCGATGCTTTTTGCAATACTTTCAGAGCTTTTTGGGTTGAAATATTATGCAACGATCTTCAATTGTGCTCAATTAGCAGTCCCAATCGGATCATATATACTAAATGTGGATGTCATTGGGAAATTTTATGATCATGAAGCAACAAAAGGTGGTAGCACTAGGGATGGGAAAGGATTGACTTGCAAGGGAACTCATTGTTTTAGTGGATCATTCTTGGTTTTGTCTGTGGTGGTGTTGATTGGAGGTGTGGCCTCACTTGTGTTGGCATTTAGAACAAGAGATTTTTACAAAGGAGATGTTTATAAGAAGTATAGAGAAGATATGTGGATTCCTCAATCAGATATGGAATTTTATTGTTTGGATAACAAGAAAAAGGTTGTCAACAATAATTTGCCAAGGGTTGTTATGCCTCCTAAATATAGCTTTCTCAATATAATATAG 1794 39.58 MAVNNFLPFVKQLTAGRWFSVFASFLIMIGAGSTYVFGTYSKVIKTQFNYSQTEINTLGFAKDLGSNLGVFAGFLGEIAPPWVLLVVGAFLNFYSYFMIWLSVTRRIAKPQLWQMFFYICLAANSQNFANTAVLVTSVRNFPDRRGIILGLLKGFVGIGGAILTQFFLALYGHENPSNLVLLLSWFPTLISLAFFLSIRTINIRRHPEELRVLYHLLYVSIILALFLLFLTITQKQAAFSSAGYTSGAAVIVGLLSIPLLIAVREELMLFKLKGQTDNNPSPPVFIPEMKSSSNSTPKNNESLTPIEEIPETNSPTCLSNVFNKPERGEDFTILQALFSKDMGLILVGTLFGCGSSIAAIDNIGQIGESLGYTSKSISIFVSWVSIFNFFGRVGSGFISETLMTKYKLPRPLMFACAHFFTCIGMLFVAFPYPGSIYGASLIIGFGFGAQVPMLFAILSELFGLKYYATIFNCAQLAVPIGSYILNVDVIGKFYDHEATKGGSTRDGKGLTCKGTHCFSGSFLVLSVVVLIGGVASLVLAFRTRDFYKGDVYKKYREDMWIPQSDMEFYCLDNKKKVVNNNLPRVVMPPKYSFLNII 597
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4993356 4995149 - MELO3C004982.2.1 Cme12g00361 343578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00361 597 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 558 - -
Cme12g00361 597 MobiDBLite consensus disorder prediction 288 312 - -
Cme12g00361 597 SUPERFAMILY MFS general substrate transporter 17 545 IPR036259 -
Cme12g00361 597 Pfam Nodulin-like 17 262 IPR010658 -
Cme12g00361 597 Gene3D MFS general substrate transporter like domains 342 567 IPR036259 -
Cme12g00361 597 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 4 558 - -
Cme12g00361 597 CDD MFS_Mch1p_like 16 532 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g00357 Cme-Chr12:4920273 Cme12g00361 Cme-Chr12:4993356 0 dispersed
Cme12g00361 Cme-Chr12:4993356 Cme12g00373 Cme-Chr12:5209699 0 dispersed
Cme12g00361 Cme-Chr12:4993356 Cme12g00366 Cme-Chr12:5071698 0 proximal
Cme12g00360 Cme-Chr12:4969378 Cme12g00361 Cme-Chr12:4993356 3.21E-65 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00361 - - cmo:103502570 1148.65