Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00366 ATGGGTTCGAACTGTGGCTCAGAAAATTGGCGATTTGTGAAGCAAGTTCTCCAAGGACGATGGTTTTCAATATTCGCTGCATTTCTCATCATGATCGGTTGTGGTTCGACTTACTTGTTTGGAACATACTCAAAAGTTTTGAAGACCAAATTTGATTTCAATCAAACCCAACTTAGCTCCTTGGGTTTTGCTAAAGATCTCGGTGCCAACCTTGGCGTTTTCGCCGGACTTTTTGCCGAGGTGGCTCCACCGTGGATGCTTTTCCTTGTAGGTTTAACCCTCAACTTCTTTAGCTACTTCATGATTTGGCTCTCCCTTTCTGAGTACGTCCCAAAGCCTGACTTGTGGTTAATGTTTATTTACATTTACATTTCCGCTAATGCACAAAACTTTGCCAATACGGCCGTCATGGTAACTAGTGTTAGAAATTTTCCTGATCAAAGAGGCGTCGTTTTAGGGCTTCTCAAAGGCTTTGTGGGACTTGGCGGAGCAATTTTAACTCAAATCTATTTTAGCATTTATGGTCATGAAGATCCTATTAGTCTTGTCCTTCTTCTTTCATGGCTACCCTCCCTTGTATGTTTCTTGTTTTTTCTCTCATTTCGAACAGTCAAAGCCCGTAAACATCCACAAGAACTTAAAGTGTTTTTCCATTTACTCTACGTCTCATTAACAATGGCGGCCTTCATCTTGTTCCTCACCATAACCCAAAAGAGCACTCCTTTCACTCATGCTAAATATGTTGGTGGAGTGTCCGTTATCGTAGCCTTACTCTCTCTCCCCTTGTTAATCGCTGTTAAAGAAGAACTATTTCTCTTCAAACTCAATAAACAAACCAAAGATCCTTCAGTTGTAGTATCAATTCCTGTTCAAAAACTTGAAGAAATTGTCGAAACTTCTTCGTCCCCGTCTCTCTCGGACAATTTATCTAACAAGCCACAAAGAGGAGATGATTTTGGCATCTTACAAGCTTTGTTAAGTAAAGACATGGCTCTTATATTCATAGCAACAGTTTCGGCTTGCGGTTCATCAGTTGCTGCCATTGACAATCTAGGCCAAATCGCTGAATCACTTAACTACCCATCTAAATCCATAAGCGTCTTCGTTTCATGGATTTCCATTTTCAATTTCTTCGGCAGAGTTTGCTCCGGTTTCGTCTCCGAAACACTCATGACCAAATACAAATTACCTCGTCCTCTTATATTTGGGCTTACCCAAATCATAACTTGCATTGGTCTAGTCGCCATTGCCTTCCCTTTTAACAACTCAGTGTATGCAGCTTCATTGATCATTGGGTTTGGTTTCGGAGCTCAAACTCCATTGCTATTTGCTTTAATCTCTGATCTCTTTGGGCTCAAACATTACTCAACTCTTCTGAATTGTGGGCAATTGGCAGTTCCATTTGGCTCTTATATAATGAATATTCATGTAGTAGGGAGGTTATATGATAGAGAAGCTACTAAAATTGGTAACGTGAAGACTGGGAAAGGATTAACATGCACTGGAATTCATTGTTTTAGTGAATCTTTTGGGATTTTGGTAATAGTGACATTGTTTGGAGCAATGGCTTCGTTTGTTTTGGCTTATAGGACAAAAGAATTTTATAAAGGGGATATATATAAGAGATATAGAGATGATAAAATGTGGACGACTCAATCGGATGTCGAATTATTTTCCTCATCCGATGGTAAGAAGATGAAGAACTGTGACGAAGAACATGACCATGATGGAAATAAATTTATCTCTAAATAG 1752 39.5 MGSNCGSENWRFVKQVLQGRWFSIFAAFLIMIGCGSTYLFGTYSKVLKTKFDFNQTQLSSLGFAKDLGANLGVFAGLFAEVAPPWMLFLVGLTLNFFSYFMIWLSLSEYVPKPDLWLMFIYIYISANAQNFANTAVMVTSVRNFPDQRGVVLGLLKGFVGLGGAILTQIYFSIYGHEDPISLVLLLSWLPSLVCFLFFLSFRTVKARKHPQELKVFFHLLYVSLTMAAFILFLTITQKSTPFTHAKYVGGVSVIVALLSLPLLIAVKEELFLFKLNKQTKDPSVVVSIPVQKLEEIVETSSSPSLSDNLSNKPQRGDDFGILQALLSKDMALIFIATVSACGSSVAAIDNLGQIAESLNYPSKSISVFVSWISIFNFFGRVCSGFVSETLMTKYKLPRPLIFGLTQIITCIGLVAIAFPFNNSVYAASLIIGFGFGAQTPLLFALISDLFGLKHYSTLLNCGQLAVPFGSYIMNIHVVGRLYDREATKIGNVKTGKGLTCTGIHCFSESFGILVIVTLFGAMASFVLAYRTKEFYKGDIYKRYRDDKMWTTQSDVELFSSSDGKKMKNCDEEHDHDGNKFISK 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5071698 5073449 - MELO3C004978.2.1 Cme12g00366 343583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00366 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 549 - -
Cme12g00366 583 Gene3D MFS general substrate transporter like domains 14 215 IPR036259 -
Cme12g00366 583 Pfam Nodulin-like 20 265 IPR010658 -
Cme12g00366 583 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 6 549 - -
Cme12g00366 583 SUPERFAMILY MFS general substrate transporter 223 533 IPR036259 -
Cme12g00366 583 Gene3D MFS general substrate transporter like domains 330 567 IPR036259 -
Cme12g00366 583 SUPERFAMILY MFS general substrate transporter 8 209 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g00360 Cme-Chr12:4969378 Cme12g00366 Cme-Chr12:5071698 1.49E-61 dispersed
Cme12g00366 Cme-Chr12:5071698 Cme12g00373 Cme-Chr12:5209699 0 dispersed
Cme12g00361 Cme-Chr12:4993356 Cme12g00366 Cme-Chr12:5071698 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00366 - - csv:101204873 1044.26