Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00367 ATGGAAGTTGAAGATGACTACCGAAGAAAACAGCAGCTCGTTCTCTTAGCAATCGTTGTTCTTGCTTCTCTCGCTCTCGTTTCTCTTCTCGTTGCTTTTAGCTACTACTGCTATATCAGCAATAAGGTCTCTAAACGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAGATGGAGGTAGTTTTGAAAATGTTAAAGAATTTTCAACTGAGAAAGGTCTCCAATTATTCACCTTCAAGCAGCTACACTCAGCAACTGGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGCCATGTATATAGAGGAGTCCTGAATGATGGGAGAAAGGTTGCGATTAAGCTTATGGATCAAGCGGGAAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGGCGGCTTCATTCGCCATATTTGTTGGCATTGCTCGGGTACTGCTCGGATAACAACCATAAATTGCTCGTATACGAGTTCATGGCCAATGGCGGTCTGCAAGAACATCTATACCCTGTTGGCAGTTCAAATTCCATCAGCGTTAAGTTGGACTGGGAAACACGATTGAGAGTTGCACTCGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACACGTATGCCCCCCAGTAATTCATAGGGATTTCAAGAGCAGCAATGTTCTGTTGGACAAAAATCTTCATGCTAAGGTTTCTGATTTTGGATTGGCAAAAATCGGCTCAGACAAAGCCGGGGGTCATGTCTCTACTCGAGTTTTGGGGACACAAGGCTATGTTGCCCCTGAGTATGCACTAACAGGGCATTTAACGACAAAATCAGATGTTTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTCACAGGTAGAGTCCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCTCTTGTTTCTTGGGCTTTGCCGAGGCTGACCGACAGGGAGAGAGTGATGCATATAATGGACCCTGCATTGGAAGGTCAGTATTCTATGAAAGATGTTGTTCAAGTGGCAGCAATTGCAGCAATGTGTGTTCAACCGGAAGCAGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCATTAGTTCCACTTGTGAGAAATTATAGGACAACTTCAAAGATTATTGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCGCCTGCACCGCACGACAATGCTAGTTCGGGAGACTGA 1203 45.14 MEVEDDYRRKQQLVLLAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRADLEDGGSFENVKEFSTEKGLQLFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLRRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPVGSSNSISVKLDWETRLRVALEAAKGLEYLHEHVCPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDRERVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTTSKIIGSSSSSSATKSPAPHDNASSGD 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5086706 5090415 + MELO3C004977.2.1 Cme12g00367 343584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00367 400 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Cme12g00367 400 PANTHER OS07G0227300 PROTEIN 3 396 - -
Cme12g00367 400 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Cme12g00367 400 MobiDBLite consensus disorder prediction 378 400 - -
Cme12g00367 400 CDD STKc_IRAK 94 367 - -
Cme12g00367 400 SUPERFAMILY Protein kinase-like (PK-like) 63 364 IPR011009 -
Cme12g00367 400 PANTHER OS01G0750732 PROTEIN 3 396 - -
Cme12g00367 400 Gene3D Transferase(Phosphotransferase) domain 1 164 384 - -
Cme12g00367 400 Gene3D Phosphorylase Kinase; domain 1 52 163 - -
Cme12g00367 400 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cme12g00367 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g00099 Cme-Chr7:629380 Cme12g00367 Cme-Chr12:5086706 2.86E-96 dispersed
Cme12g00367 Cme-Chr12:5086706 Cme06g02265 Cme-Chr6:29655336 2.06E-109 dispersed
Cme12g00367 Cme-Chr12:5086706 Cme02g00113 Cme-Chr2:849433 5.53E-146 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65298 PF07714 PK_Tyr_Ser-Thr 9.50E-45 CL0016 Cme PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00367 - - csv:101204636 745.347