Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00372 ATGGTTTCTCAATCGCCCACCAGTTCCGACGCCTCCCACCCCCGCCGACCTCTCCAATTCCCCTTGCAGGTCATCACCGGTCGCTGGTTCACCGTCTTCGCTACATTTTTAATCATGGCTGGCGCCGGTGCTACCTATCTCTTCGGTGTCTACTCCAAACAGATCAAATCCGCACTTGGGTATGATCAAACCACTTTGAATCTCATGGGGTTTTTCAAAGATCTGGGTGCTAACGTCGGTGTGTTGTCTGGTTTAGTGGCGGAGGTTACGCCCACTTGGTTCGTTCTTCTCCTTGGCTCCGCCTTGAACTTCACCGGTTACTTCATGATTTGGCTTGCCGTCACCGGCAGAATCGCCAAGCCCAAAGTCTGGCAAATGTGTCTCTACATTTGTGTTGGAGCTAATTCCCAGAATTTTGCTAATACCGGCGCTTTGGTTACTTGTATCCAGAATTTTCCCGAGAGTCGCGGCGCTATGATGGGTCTTTTGAAGGGTTTCACAGGGCTTAGCGGCGCCATTCTCACGGAGATTTATAGGGCCGTTTATGCCGACGATGCCACGGCGTTGATTCTACTTATTGGGTGGCTTCCGGCGGCGATTTCCGTCGTTTTTGTTTTCACCATTCGGAGGCTTAAAGCAGAGAGACAACCGAATGAGAAGAGGGTTTTTTACCATTTCCTTTATATCTCAATTGGGTTAGCGGTTTTCATCATGATTATGAATATTGTTCAGAAGAAAGTTGAATTCAATCATACAGCTTATACATTAAGTGCTACCGTGATCTGCATTTTTCTGTTTCTTCCTCTGTTAATTGTGATCCGTGAAGAACTTCGTCTCTGGAATGCAAATAAATCTCCCCCAATTCCAATCGAAAACCCACAACCAAAACCAATCGATGAACCCAAAATCATAACCGAAGAATCAAATCAAATCACTAAGATCCAAAATCAAAGCCCACCAGCACCACCGCCAGAGGTGGCCTGTTTCTCCAACATTTGTCGTAAACCACCCAGAGGAGACGATTACACAATCCTTCAAGCACTTCTCAGCATCGATATGTTCGTTCTATTCATCGCTACATTCTGTGGATTAGGCACAAGCTTAACTGCAGTTGACAATTTAGGACAAATCGGTGAATCACTTGGCTACCCGTTAAAAACAGTAAGCTCATTCGTTTCGTTAGTAAGCATTTGGAATTACTTCGGCAGAATATTCGCCGGATTCGTTTCCGAAAGCCTTCTCGCAAGATACAAATTCCCAAGACCATTAATGATGACATTAGTTCTTCTCCTCTCTTGCATCGGCCAACTCTTAATCGCATTCCCTGTTCCGGGTTCCGTCTACATAGCTTCGGTAATTATCGGATTCTCCTTCGGTGCACAGCTTCCTCTGCTTTTCGCCATAATATCTGAACTCTTTGGGCTGAAATATTTCTCCACTTTATTCAATTGTGGGCAAATCGCAAGCCCATTGGGATCGTACATTCTGAATGTGAAGGTGGCGGGAATGTTGTACGATATTGAAGCTTTGAAGCAGTTGAAGGAGAAGGGGTTGGATAGATCGGCGGTGAAGGAATTGACATGCATTGGGAAGGAATGTTACAGGAAATCATTTACGATAACAACGATTGTTACGTTTGCTGGAGCAATGGTTTCGTTGATATTGGTGATGAGAACGAGGGAGTTTTACAAAGGGGATATTTACAAGAAGTTTAGAGAAGAAGAAGTGAAGAAAGAGGAGAAGATAATCAATGGCGGAGGAGAAATTACAGCTAAGTGA 1779 44.91 MVSQSPTSSDASHPRRPLQFPLQVITGRWFTVFATFLIMAGAGATYLFGVYSKQIKSALGYDQTTLNLMGFFKDLGANVGVLSGLVAEVTPTWFVLLLGSALNFTGYFMIWLAVTGRIAKPKVWQMCLYICVGANSQNFANTGALVTCIQNFPESRGAMMGLLKGFTGLSGAILTEIYRAVYADDATALILLIGWLPAAISVVFVFTIRRLKAERQPNEKRVFYHFLYISIGLAVFIMIMNIVQKKVEFNHTAYTLSATVICIFLFLPLLIVIREELRLWNANKSPPIPIENPQPKPIDEPKIITEESNQITKIQNQSPPAPPPEVACFSNICRKPPRGDDYTILQALLSIDMFVLFIATFCGLGTSLTAVDNLGQIGESLGYPLKTVSSFVSLVSIWNYFGRIFAGFVSESLLARYKFPRPLMMTLVLLLSCIGQLLIAFPVPGSVYIASVIIGFSFGAQLPLLFAIISELFGLKYFSTLFNCGQIASPLGSYILNVKVAGMLYDIEALKQLKEKGLDRSAVKELTCIGKECYRKSFTITTIVTFAGAMVSLILVMRTREFYKGDIYKKFREEEVKKEEKIINGGGEITAK 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5205738 5207792 + MELO3C027299.2.1 Cme12g00372 343589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00372 592 SUPERFAMILY MFS general substrate transporter 29 566 IPR036259 -
Cme12g00372 592 CDD MFS_Mch1p_like 27 549 - -
Cme12g00372 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 580 - -
Cme12g00372 592 Pfam Nodulin-like 28 273 IPR010658 -
Cme12g00372 592 Gene3D MFS general substrate transporter like domains 349 592 IPR036259 -
Cme12g00372 592 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 16 580 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g02495 Cme-Chr4:31343385 Cme12g00372 Cme-Chr12:5205738 5.15E-11 dispersed
Cme10g00105 Cme-Chr10:725073 Cme12g00372 Cme-Chr12:5205738 0 dispersed
Cme11g00393 Cme-Chr11:3987240 Cme12g00372 Cme-Chr12:5205738 8.83E-105 dispersed
Cme12g00349 Cme-Chr12:4837076 Cme12g00372 Cme-Chr12:5205738 0 dispersed
Cme12g00351 Cme-Chr12:4856458 Cme12g00372 Cme-Chr12:5205738 9.12E-45 dispersed
Cme12g00372 Cme-Chr12:5205738 Cme12g00373 Cme-Chr12:5209699 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00372 - - csv:101217765 1066.22