Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00377 ATGAGAACCTTCCACCTTTCTTGGATTTCCTTCTTCACATGCTTTGTGTCGACGTTCGCAGCTGCCCCTCTCGTCCCCATCATTCGCGACAACCTGAACCTGACGAAAGTCGACATCGGGAACGCTGGAGTTACATCTGTTTCTGGGAGTATCTTCTCTCGTCTTGTGATGGGGGCTGTGTGCGACCTTCTGGGACCACGATATGGATGTGCGTTTTTGATAATGTTATCGGCTCCAACGGTGTTTTGTATGTCGTTTGTGTCGAATGCTGCTGGTTACATAGCGGTTAGATTCATGATCGGGTTTTCGCTAGCAACGTTCGTGTCGTGTCAGTATTGGATGAGTACAATGTTTAATAGTCAGATAATAGGGCTTGTGAACGGGACAGCAGCTGGGTGGGGGAATATGGGAGGAGGAGCAACTCAATTAATAATGCCATTGTTGTATGATGTTATTCAGAGAGCTGGTGCTACTCCTTTTACTGCTTGGAGGATCGCTTTCTTCATTCCTGGTTTCCTTCATGTTCTTATGGGCATTTTGGTTTTGACTCTTGGTCAAGACTTGCCTGATGGTAACCTTGCTAGTCTTCAGAAGAAGGGAAATGTTGCCAAAGACAAATTCTCCAATGTCTTGTGGTATGCTGTCACCAATTATCGAACTTGGATCTTCGTCCTCCTCTATGGCTACTCCATGGGAGTTGAGCTTTCCACCGATAATGTCATTGCCGAATATTTCTACGATAGGTTTGATCTAAAGCTTCACACAGCAGGAATCATTGCAGCAACGTTCGGGATGGCGAATCTAGTGGCTAGACCGTTTGGAGGGTATGCATCGGACGTAGCAGCGCGATACTTCGGGATGAGAGGAAGGTTGTGGACACTATGGATCCTACAAACAGCTGGGGGAGTGTTTTGCATGTGGCTAGGGAAAGCAACCAAGTTGCCAATAGCAATAGTGGCAATGATATTGTTCTCAATAGGAGCACAAGCAGCATGTGGAGCCACATTTGGTATAATTCCATTCATATCAAGGAGATCTCTAGGAATAATATCAGGACTAACAGGAGCTGGTGGGAACTTTGGAAGTGGTTTAACACAATTAGTATTCTTCTCAACAACAAAATACTCAACAGACACAGGATTGTTCTTGATGGGAATAATGATTGTTTGTTGCACTCTTCCAATAACTTTGGTTCATTTCCCTCAATGGGGAAGCATGTTTCTACCACCAACTAAACATGTTGAAAAATCAACTGAAGAATTTTATTATGGTTCTGAATGGACTGAGGATGAAAAGAAGAAA 1302 44.16 MRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKVDIGNAGVTSVSGSIFSRLVMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVSNAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSQIIGLVNGTAAGWGNMGGGATQLIMPLLYDVIQRAGATPFTAWRIAFFIPGFLHVLMGILVLTLGQDLPDGNLASLQKKGNVAKDKFSNVLWYAVTNYRTWIFVLLYGYSMGVELSTDNVIAEYFYDRFDLKLHTAGIIAATFGMANLVARPFGGYASDVAARYFGMRGRLWTLWILQTAGGVFCMWLGKATKLPIAIVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLVFFSTTKYSTDTGLFLMGIMIVCCTLPITLVHFPQWGSMFLPPTKHVEKSTEEFYYGSEWTEDEKKK 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5256421 5257947 + MELO3C000140.2.1 Cme12g00377 343594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00377 434 Gene3D MFS general substrate transporter like domains 203 405 IPR036259 -
Cme12g00377 434 SUPERFAMILY MFS general substrate transporter 2 400 IPR036259 -
Cme12g00377 434 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 434 - -
Cme12g00377 434 Gene3D MFS general substrate transporter like domains 1 193 IPR036259 -
Cme12g00377 434 CDD MFS_NRT2_like 4 397 IPR044772 GO:0015112
Cme12g00377 434 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 434 IPR044772 GO:0015112
Cme12g00377 434 Pfam Major Facilitator Superfamily 8 364 IPR011701 GO:0022857|GO:0055085
Cme12g00377 434 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 397 IPR020846 GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme10g00545 Cme-Chr10:3479549 Cme12g00377 Cme-Chr12:5256421 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00377 K02575 - csv:101218006 874.774