Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00396 ATGGCTTCGTCTCCTAAAGAATCTCCAGCCAACAATCCAGGACTTCATGCTACTCCTGATGATGCCACTAAAGGTTACATCATGCAACAGACTATGTATCGGATTAAGGATCCTAAAGTCAGTCTCGACTTCTATTCTCGAGTTCTGGGAATGTCATTACTCAAGAGGCTGGATTTCCCGGAAATGAAGTTTAGCTTGTACTTTATGGGTTATGAGGATACAGTGTCTGCACCAGAAAGCTCAGTTGATAGAACAGTGTGGACCTTTGGTCGAAAGGCTACGATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCCGAATTCAAAGGATATCATAATGGGAACTCAGATCCTCGTGGCTTTGGACACATTGGCATAACTGTTGATGACACAATTAAGGCATGTGAAAGATTTGAACGCTTAGGTGTCGAATTCGTTAAAAAACCAGATGACGGCAAGATGAAAGGAATTGCATTTATCAAGGATCCTGATGGCTACTGGATTGAAATCTTTGATCTCAAAACTATTGGAAAAGTTACTTCTGAGGCTGCTTGA 558 41.94 MASSPKESPANNPGLHATPDDATKGYIMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTVSAPESSVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTIKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGKVTSEAA 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5696971 5702774 + MELO3C004950.2.1 Cme12g00396 343613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00396 185 ProSitePatterns Glyoxalase I signature 1. 30 51 IPR018146 GO:0004462|GO:0046872
Cme12g00396 185 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 174 IPR037523 -
Cme12g00396 185 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 18 173 IPR029068 -
Cme12g00396 185 ProSitePatterns Glyoxalase I signature 2. 115 131 IPR018146 GO:0004462|GO:0046872
Cme12g00396 185 TIGRFAM glyox_I: lactoylglutathione lyase 16 179 IPR004361 GO:0004462|GO:0046872
Cme12g00396 185 MobiDBLite consensus disorder prediction 1 21 - -
Cme12g00396 185 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 3 181 - -
Cme12g00396 185 Gene3D - 4 180 IPR029068 -
Cme12g00396 185 PANTHER LACTOYLGLUTATHIONE LYASE 3 181 - -
Cme12g00396 185 CDD GlxI_Zn 28 172 - -
Cme12g00396 185 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 29 171 IPR004360 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g00396 Cme-Chr12:5696971 Cme12g01496 Cme-Chr12:22562970 5.39E-09 dispersed
Cme12g00396 Cme-Chr12:5696971 Cme08g00408 Cme-Chr8:2507543 7.97E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00396 K01759 - csv:101220380 380.948