Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00492 ATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAGTAATGGAATTTGATGTTGATGATGAACAGAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAATGTAGTTCCCTTCTCCAATTTGGAGAAGCTTTGTGGCCCAGTT 336 44.35 MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILANVVPFSNLEKLCGPV 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8351084 8352241 - MELO3C004864.2.1 Cme12g00492 343709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00492 112 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 98 - -
Cme12g00492 112 Pfam Cyclin-dependent kinase regulatory subunit 4 80 IPR000789 GO:0016538
Cme12g00492 112 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Cme12g00492 112 PRINTS Cyclin-dependent kinase regulatory subunit signature 65 79 IPR000789 GO:0016538
Cme12g00492 112 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Cme12g00492 112 PRINTS Cyclin-dependent kinase regulatory subunit signature 50 64 IPR000789 GO:0016538
Cme12g00492 112 SMART CKS_2 3 82 IPR000789 GO:0016538
Cme12g00492 112 SUPERFAMILY Cell cycle regulatory proteins 1 93 IPR036858 GO:0016538
Cme12g00492 112 Gene3D - 1 96 IPR036858 GO:0016538
Cme12g00492 112 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Cme12g00492 112 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 98 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme11g01851 Cme-Chr11:26691302 Cme12g00492 Cme-Chr12:8351084 2.22E-47 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00492 K02219 - csv:101204120 166.392