Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme12g00492 | ATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTATGAGTACAGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAGTAATGGAATTTGATGTTGATGATGAACAGAATGAATGGAGAGCAATCGGCGTTCAACAAAGCCGTGGATGGGTTCATTATGCAATTCATCGCCCAGAGCCGCACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAATGTAGTTCCCTTCTCCAATTTGGAGAAGCTTTGTGGCCCAGTT | 336 | 44.35 | MGQIQYSEKYFDDIYEYRHVVLTPEVAKLLPKNRLLSEVMEFDVDDEQNEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILANVVPFSNLEKLCGPV | 112 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 8351084 | 8352241 | - | MELO3C004864.2.1 | Cme12g00492 | 343709 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme12g00492 | 112 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT | 1 | 98 | - | - | |
Cme12g00492 | 112 | Pfam | Cyclin-dependent kinase regulatory subunit | 4 | 80 | IPR000789 | GO:0016538 | |
Cme12g00492 | 112 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 18 | 32 | IPR000789 | GO:0016538 | |
Cme12g00492 | 112 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 65 | 79 | IPR000789 | GO:0016538 | |
Cme12g00492 | 112 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 3 | 17 | IPR000789 | GO:0016538 | |
Cme12g00492 | 112 | PRINTS | Cyclin-dependent kinase regulatory subunit signature | 50 | 64 | IPR000789 | GO:0016538 | |
Cme12g00492 | 112 | SMART | CKS_2 | 3 | 82 | IPR000789 | GO:0016538 | |
Cme12g00492 | 112 | SUPERFAMILY | Cell cycle regulatory proteins | 1 | 93 | IPR036858 | GO:0016538 | |
Cme12g00492 | 112 | Gene3D | - | 1 | 96 | IPR036858 | GO:0016538 | |
Cme12g00492 | 112 | ProSitePatterns | Cyclin-dependent kinases regulatory subunits signature 1. | 6 | 24 | IPR000789 | GO:0016538 | |
Cme12g00492 | 112 | PANTHER | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 | 1 | 98 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme11g01851 | Cme-Chr11:26691302 | Cme12g00492 | Cme-Chr12:8351084 | 2.22E-47 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme12g00492 | K02219 | - | csv:101204120 | 166.392 |