Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00600 ATGTTTCCTAAAATTATTCACTTCTTCTTTTGCCTCTTGCTTTCTCCCCTCATTCTTCACTCTACGTTATCATCATCCATTTCTTCACGTGTGTATATAGTGTACTTGGGGCACAACCATTTGAATGACGATGCAACTTTGACCTCCAAATACCATCTTCGTCTACTCTCAAAAGTGTTTGCAAGTGAAGAAGATGGTAAAAGAGCCATGTTGTATAGCTACAAGAAAAGTTTTTCAGGGTTTTCAGCAAAGCTTAATGCAAGCCAAGCAATTGCATTATCAAAGATGGAAGACGTGATATCTGTGTTTGAGAGTAGAACAATGGAACTCCATACAACAAGAAGTTGGGATTTCTTGGGACTTCCCATTCCCTCCTATACTAATAATAGGAGTACATTATTTCCGCTTCGTCTTCCTAGCTATGGCGATCATGATGTTGTTGTTGGCATATTTGATTCAGGTGTGTGGCCGGAATCGAAAAGTTTTGACGAAAATGAAGGAATAGGGAGAATTCCATGCAACTGGAAAGGAAAATGTGTTAAAGGGTATAGATTCAATCCAGCATCAGCTTGCAATCGCAAGCTAATCGGTGCTCGGTATTACCTTAATGGCTTTGAAGCCCAATATGGAGCACTAAACACCACCGCCGAAAACCCCGAGTTTCGATCCCCTCGAGACTTCTTAGGTCATGGGACTCACACTGCTTCCACCGCGGTGGGTGCCGTTGTGCACAATGTTGCCTTCCCTACATCTTCATTGCTAGCCAAAGGGACTGCTCGAGGGGGTGCTCCCTGGGCCAGGCTGGCAGTGTACAAGGTGTGTTGGGGGAAGGACTATGAAGGTAAGTGCACCGATGCGGATGTCATGGCCGCTTTTGACGATGCTTTGCACGACGGGGTGGACGTGATCTCTGCATCTTTTGGAGAGACGCCACCGTTGACTCCGTTGTTCGAGTCAGCTTCTGCTATTGGTTCATTCCATGCGATGCAGCGGGGAGTGAGTGTGGTGTTCTCAGCTGGGAATGATGGACCCCATCCTTCCCTTGTTCAAAATGTGTCTCCTTGGAGTATTTGTGTAGCTGCTTCTACTATGGATCGTACCTTCCCCACTCCAATATTTATCCTCAACCACTTCTCCATCATGGGGGAGAGCTTGATCACAACAAATATAATAAACGTAAAGTTGGCAGATGCAATCAACTATTTCAATGATGGAATTTGCGAGAGAAAAAATATAAGAAAAGGTGGAAAATCAGGTAAAGGGAAAGTGGTGGTATGTTTCTCCACAGTTGGTCAAGTTTCCATAGCAACTGCTCAAGAAGCACTGAAAGCCATAAATGCATCAGCTTTGATATTTGGTGCACCTCCCACTACTGAGCTCCCAGATTTAGATCTAATCCCCACCGTTCGTATTGACATTGATCAAGCTACTCAAATTCGAAACCTCCTTGCTGAATTACCCAGACTGCCTATGGTCGAGATCGGAGTTGCGAGAAGTGTGATCGGGAAATCTGTAGCTCCTACTGTGGCTTACTTTTCGTCTAGAGGACCAAGCTCTATTTTACCTGACATTCTCAAGCCAGATATAAGTGCACCAGGAGTGAACATATTGGCAGCATGGCCTCCAGAAACAGCACCAACGGTGAGGCCAAGTGGAAAGTTTAATGAAGAAGAAGAAGGTGTAAAATGGAATTTCCAATCAGGAACCTCAATGTCATGTCCACACATTTCTGGGGTTGTTGCTCTTATCAAATCTGTCCATCCCAATTGGTCTCCTGCAGCGATTAGATCTGCCATTATCACCACAGCCACAAAGGTAGACACGAGTGGGAATACCATCCTAGCAGGCGGATCCATGAAAGCATCAGACCCATTCGACATTGGTGCAGGCCAAGTGAATCCCATAATGGCAATAAATCCAGGACTTATCTATGACATAACAACAAATGATTACATTACTTTCCTATGCAATATTGGCTACACTGACCAACAAATCAACAATTTAATTCTCAACCCTTCTCCTCATTTTTGTTGTCGTCAGTCCACTGCTACCATTGCAAACTTTAATTATCCGTCAATTACACTCGCCAATCTTCGCTCCACCACCACAATTAGAAGAATTGTCCGCAATGTATCACTCAACAAGAACGCTATTTACTTTCTTAGGGTTCTTCCTCCCTATGGAGTTCGAGTACAGGTTTGGCCGAGGGTTCTCTTTTTCTCTTGCTTTAGGCAACAAATTTCATACTATGTTACTATAACTCCGCTTAGGAAATCTCGAGGAAGATATGGTTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTTACAAGTCCTCTCGTTGTACGTCTTGCTACTTACCTTGTACATACCAATTAG 2382 43.91 MFPKIIHFFFCLLLSPLILHSTLSSSISSRVYIVYLGHNHLNDDATLTSKYHLRLLSKVFASEEDGKRAMLYSYKKSFSGFSAKLNASQAIALSKMEDVISVFESRTMELHTTRSWDFLGLPIPSYTNNRSTLFPLRLPSYGDHDVVVGIFDSGVWPESKSFDENEGIGRIPCNWKGKCVKGYRFNPASACNRKLIGARYYLNGFEAQYGALNTTAENPEFRSPRDFLGHGTHTASTAVGAVVHNVAFPTSSLLAKGTARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGETPPLTPLFESASAIGSFHAMQRGVSVVFSAGNDGPHPSLVQNVSPWSICVAASTMDRTFPTPIFILNHFSIMGESLITTNIINVKLADAINYFNDGICERKNIRKGGKSGKGKVVVCFSTVGQVSIATAQEALKAINASALIFGAPPTTELPDLDLIPTVRIDIDQATQIRNLLAELPRLPMVEIGVARSVIGKSVAPTVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGKFNEEEEGVKWNFQSGTSMSCPHISGVVALIKSVHPNWSPAAIRSAIITTATKVDTSGNTILAGGSMKASDPFDIGAGQVNPIMAINPGLIYDITTNDYITFLCNIGYTDQQINNLILNPSPHFCCRQSTATIANFNYPSITLANLRSTTTIRRIVRNVSLNKNAIYFLRVLPPYGVRVQVWPRVLFFSCFRQQISYYVTITPLRKSRGRYGFGEIQWFNRFHTVTSPLVVRLATYLVHTN 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10639491 10645929 - MELO3C004753.2.1 Cme12g00600 343817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00600 793 ProSitePatterns Serine proteases, subtilase family, serine active site. 568 578 IPR023828 -
Cme12g00600 793 Pfam Fibronectin type-III domain 687 783 IPR041469 -
Cme12g00600 793 Gene3D - 655 786 - -
Cme12g00600 793 PRINTS Subtilisin serine protease family (S8) signature 567 583 IPR015500 -
Cme12g00600 793 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Cme12g00600 793 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Cme12g00600 793 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 25 780 - -
Cme12g00600 793 SUPERFAMILY Subtilisin-like 110 642 IPR036852 GO:0004252|GO:0006508
Cme12g00600 793 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
Cme12g00600 793 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 111 IPR037045 -
Cme12g00600 793 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 780 IPR045051 -
Cme12g00600 793 CDD Peptidases_S8_3 109 604 IPR034197 -
Cme12g00600 793 Pfam Subtilase family 144 606 IPR000209 GO:0006508|GO:0008236
Cme12g00600 793 Gene3D - 365 501 - -
Cme12g00600 793 ProSiteProfiles Serine proteases, subtilase domain profile. 115 638 - -
Cme12g00600 793 Gene3D Peptidase S8/S53 domain 145 651 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme07g01634 Cme-Chr7:22094314 Cme12g00600 Cme-Chr12:10639491 1.05E-176 dispersed
Cme12g00600 Cme-Chr12:10639491 Cme01g00577 Cme-Chr1:4409737 2.03E-161 dispersed
Cme12g00600 Cme-Chr12:10639491 Cme01g02803 Cme-Chr1:35044878 1.30E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00600 - - csv:101206755 1470.68