Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00762 ATGGCTGCTGCTGCTGCTGATTTCTTGCCCCCTTTGGTTATGCTGGTCGTCCAATTCCTATATGCAGGTTTGAATATTACATCAAAGTTAGCCATGGAGTTTGGAATGAATCCACTGGTTCTAGTTGCTTACAGGCAGATGTTTGCTACCATAGCCATAGCTCCTTGTGCTTACTGGTTTGAGAGAAAAGGAAGACCCAAGATTACAAAGCCTATCCTGTTTCAGATTCTACTCTGTTCCTTAACAGGGGCAACAGGAAACCAAGTCTTTTACTACGTAGGGTTAAAATATTCAACCCCGACTATCGCATGTGCATTGACCAATGTTCTGCCTGCTGCAACTTTTGTCCTTGCTGTTCTTTTCAGACAAGAATCTGTGAGGATCAAAACAAGTCCAGGTGCAGCAAAGGTGATTGGGACTGTCGTGTGTGTCGGAGGAGCGATGTTGCTGTCATTTTACCGTGGGCAAACCATTGAGCTTGGTGAATCTGGAATACATTGGAAGTATGCCGGGTTAATGAGGGGGGGAAGTTCAAGCAACCAAGGCAGCAGCATATGGGGCTCCCTCTGCTTGATCATAAGCTCTGTTGCTTGGGCGGCTTGGTTTGTTATCCAAGCAAGAGTGAACGAGAAGTTTCCAGCTCCTTACACGAGCACCGCTCTCATGACTTTCATGGCAACCATTCAGTGTGGAGCAATTGCCGTAGGAATTGAGCATAAGACTCTTGCAGCTTGGTCATTGAAAAGTTCAATCAGGCTTGTCGGCGCTCTCTATGCGGGAGTGGCATGCTCTGGGATGGCATTTTGCTTAACCTCTTGGAGTATCCAAAAGAAAGGTCCTCTCTATGCTTCAGTTTTCAGCCCCTTCTTGCTCGTTATTGTGGCTATTTTCAGCTGGGCCTTTTTTCAAGAAAAATTATACGTCGGCACTGTTGTAGGGTCATTGTTGATTGTTGTTGGGCTATATGCTGTCCTATGGGGAAAGACGAAAGAGGTGAAACTACAACAACATATTGAAATGACGGCGGCAGCAGAAGCGAAGCTAGATGACTATAATAACAAAGAAGACTTGGAAGAACAGTCCTATGTTGTTTCAAATGGCAATATTCTCCACAAGTAA 1119 45.22 MAAAAADFLPPLVMLVVQFLYAGLNITSKLAMEFGMNPLVLVAYRQMFATIAIAPCAYWFERKGRPKITKPILFQILLCSLTGATGNQVFYYVGLKYSTPTIACALTNVLPAATFVLAVLFRQESVRIKTSPGAAKVIGTVVCVGGAMLLSFYRGQTIELGESGIHWKYAGLMRGGSSSNQGSSIWGSLCLIISSVAWAAWFVIQARVNEKFPAPYTSTALMTFMATIQCGAIAVGIEHKTLAAWSLKSSIRLVGALYAGVACSGMAFCLTSWSIQKKGPLYASVFSPFLLVIVAIFSWAFFQEKLYVGTVVGSLLIVVGLYAVLWGKTKEVKLQQHIEMTAAAEAKLDDYNNKEDLEEQSYVVSNGNILHK 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13844412 13847628 - MELO3C025523.2.1 Cme12g00762 343979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00762 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Cme12g00762 372 Coils Coil 334 354 - -
Cme12g00762 372 PANTHER WAT1-RELATED PROTEIN 10 342 - -
Cme12g00762 372 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020|GO:0016021
Cme12g00762 372 Pfam EamA-like transporter family 12 151 IPR000620 GO:0016020|GO:0016021
Cme12g00762 372 PANTHER WAT1-RELATED PROTEIN 10 342 IPR030184 GO:0016021|GO:0022857
Cme12g00762 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g01011 Cme-Chr2:15099120 Cme12g00762 Cme-Chr12:13844412 1.34E-60 dispersed
Cme05g01521 Cme-Chr5:24596901 Cme12g00762 Cme-Chr12:13844412 1.30E-155 dispersed
Cme12g00762 Cme-Chr12:13844412 Cme10g00733 Cme-Chr10:4653085 1.86E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00762 - - csv:101215353 707.212