Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00798 ATGAAACTCTCTATTTCTATTCTTATTTTCTTCTCATTCCTTTTGTTAATATCACCCGCCATTGCTGCCAAGAAGTCTTATGTTGTGTTATTGGGATCTCATTCACATGGGTTAGAAGTTACAGAGAAAGATTTTGAAAGTGTAGTTGATTCCCATCACAAATTACTTGGATCCTTCTTGAGGAGTGATGAAAAGGCAAAAGATTCCATATTTTACTCCTATAAGAAGCATATAAACGGATTTGCAGCAACTCTGGATGACGAAGATGCAACCCGACTTGCAAATCATCCAGAAGTAGCAGCAGTATTGCCAAACAAACCAAAAGATTTATACACAACACATTCATGGGAATTTATGCATTTGGAGAAAAATGGTGTTGTTCCCCCTTCTTCTCCTTGGCGGATGGCTAAATTTGGAAAAGACGTCATTATCGCCAATCTTGACACCGGTGTATGGCCAGAGTCAAAGAGTTTTGGAGAACATGGCATAGATGGACCTGCTCCATCAAAGTGGAAAGGAGCAAAGTACTTCAACAAGGGTTACCTCGAGTACTTGAAATCTGAAAATTCTACTGTTGACCTCTCATCTATCATCAACTCCACTCGTGACTACGACGGTCATGGCTCCCACACACTATCCACAGCTGCTGGCAACTATGTGTTCGGCGCCAGCGTGTTTGGGTCGGGTATCGGAACAGCGAAAGGAGGATCTCCAAAGGCTCGTGTTGCTGCTTATAAGGTTTGTTGGCCATTCGAGCAAGGCGGTTGCTTTGATGCTGACATCACTGAGGCATTTGACCATGCCATCCACGATGGTGTCGACGTTCTTTCACTCTCCCTTGGCGGTGATCCCATCAAATACTCCGAGGATTCCATCGCCATTGCCTCCTTCCATGCAGTGAAGAAGGGAATCCCTGTCGTGTGCGCTGTCGGGAACTCCGGTCCCACACCGAAGACGGCTTCTAATACTGCTCCTTGGATTTTGACTGTTGGTGCAAGTACTTTGGATCGTGAATTTTATGCTCCTGTTGTGCTTCAAAATGGTCATCGCTTCATGGGTTCAAGTCATTCAAAAGGACTAACGGGAAGGAAGCTATACCCATTGATAACCGGAGCTCAGGCAAAAGCGGGTAACGCCAACGAGGACGATGCCATGCTATGCAAGCCCGAAACATTGGACCACTCAAAAGTGAAAGGGAAGATATTGGTTTGCTTGAGAGGAGAAACGGCAAGGTTGGACAAAGGGAAACAAGCGGCCCTTGCCGGTGCTGTTGGAATGATTTTATGCAACGATAAGCTCAGTGGGTCTTCAATCGTCCCCGATTTTCACCTTCTTCCAGCTTCTCATATCAATTACCAAGATGGTCAAGTTCTTCTATCTTACATCAACTCCGCCAGAAATCCAATGGGGTATTTAATCCCACCATTGGCAAAAGTTAACACCAAACCAGCTCCCACTATGGCGGTCTTCTCATCCCGAGGACCCAATACTATTTCACCAGAGATTATCAAGCCTGATGTGACCGCTCCAGGAGTAAACATAATTGCGGCATTTTCAGAAGCTATAAGTCCAACACGCGATGCATCTGACAACAGAACAACTCCATTCATTACAATGTCAGGTACCTCCATGTCTTGCCCCCACGTCGCTGGCCTCGTCGGCCTTCTCCGAAATCTCCACCCGGATTGGAGCCCCTCTGCCATTAAATCTGCCATCATGACCTCCTCCCAAGTTCGTGACAACACATTGAACCCCATGATCGATGGGGGATCTCTTGACCTCGCCCCTGCCACTCCATTTGCATATGGCTCCGGCCACATCAACCCTACTGGAGCCATTGACCCCGGCCTTGTCTACGACCTCTCCCCCAACGACTACTTGGAATTCCTCTGCGCCAGCGGCTACGACGAGAAGACCATTCGTGCATTCTCTGATGAACCTTTCAAATGTCCTCCTGCTTCGTCTGTTTTGAACCTTAATTACCCTTCCATTGGGGTTCAAAATTTGAAAGGTAGTGTGAGTGTCACTAGAAAACTGAAGAACGTTGGCAGTCCGGGAGTTTATAGAGCCCAAATTCTCCACCCCAACGGAGTTGTGGTTTCTGTGAAGCCCAGATTTTTGAAGTTTGAGAGAGTTGGAGAAGAGAAGAGCTTTGAATTGACGCTCGCTGGAGTTGTGCCAAAGGATCGGGTAGGTTACGGCGCTTTGATTTGGAGTGATGGCAGACACGTTGTCAGGAGTCCCATTGTTGTTTCTTCGGGATTATTCTGA 2271 46.9 MKLSISILIFFSFLLLISPAIAAKKSYVVLLGSHSHGLEVTEKDFESVVDSHHKLLGSFLRSDEKAKDSIFYSYKKHINGFAATLDDEDATRLANHPEVAAVLPNKPKDLYTTHSWEFMHLEKNGVVPPSSPWRMAKFGKDVIIANLDTGVWPESKSFGEHGIDGPAPSKWKGAKYFNKGYLEYLKSENSTVDLSSIINSTRDYDGHGSHTLSTAAGNYVFGASVFGSGIGTAKGGSPKARVAAYKVCWPFEQGGCFDADITEAFDHAIHDGVDVLSLSLGGDPIKYSEDSIAIASFHAVKKGIPVVCAVGNSGPTPKTASNTAPWILTVGASTLDREFYAPVVLQNGHRFMGSSHSKGLTGRKLYPLITGAQAKAGNANEDDAMLCKPETLDHSKVKGKILVCLRGETARLDKGKQAALAGAVGMILCNDKLSGSSIVPDFHLLPASHINYQDGQVLLSYINSARNPMGYLIPPLAKVNTKPAPTMAVFSSRGPNTISPEIIKPDVTAPGVNIIAAFSEAISPTRDASDNRTTPFITMSGTSMSCPHVAGLVGLLRNLHPDWSPSAIKSAIMTSSQVRDNTLNPMIDGGSLDLAPATPFAYGSGHINPTGAIDPGLVYDLSPNDYLEFLCASGYDEKTIRAFSDEPFKCPPASSVLNLNYPSIGVQNLKGSVSVTRKLKNVGSPGVYRAQILHPNGVVVSVKPRFLKFERVGEEKSFELTLAGVVPKDRVGYGALIWSDGRHVVRSPIVVSSGLF 756
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 14476674 14480393 - MELO3C026085.2.1 Cme12g00798 344015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00798 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Cme12g00798 756 ProSiteProfiles Serine proteases, subtilase domain profile. 115 613 - -
Cme12g00798 756 Gene3D - 336 480 - -
Cme12g00798 756 CDD PA_subtilisin_like 343 472 - -
Cme12g00798 756 SUPERFAMILY Subtilisin-like 111 617 IPR036852 GO:0004252|GO:0006508
Cme12g00798 756 Pfam Fibronectin type-III domain 658 751 IPR041469 -
Cme12g00798 756 PANTHER PEPTIDASE S8 12 753 - -
Cme12g00798 756 PANTHER BNAC02G33520D PROTEIN 12 753 - -
Cme12g00798 756 CDD Peptidases_S8_3 110 576 IPR034197 -
Cme12g00798 756 Pfam Peptidase inhibitor I9 26 107 IPR010259 -
Cme12g00798 756 Gene3D - 630 754 - -
Cme12g00798 756 Pfam Subtilase family 139 581 IPR000209 GO:0006508|GO:0008236
Cme12g00798 756 Gene3D Peptidase S8/S53 domain 141 626 IPR036852 GO:0004252|GO:0006508
Cme12g00798 756 Pfam PA domain 376 457 IPR003137 -
Cme12g00798 756 SUPERFAMILY Protease propeptides/inhibitors 25 106 - -
Cme12g00798 756 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Cme12g00798 756 PRINTS Subtilisin serine protease family (S8) signature 203 216 IPR015500 -
Cme12g00798 756 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cme12g00798 756 SUPERFAMILY PA domain 392 465 IPR046450 -
Cme12g00798 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g00798 Cme-Chr12:14476674 Cme08g00624 Cme-Chr8:4015273 0 dispersed
Cme12g00798 Cme-Chr12:14476674 Cme12g00800 Cme-Chr12:14495397 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00798 - - csv:101213345 1384.01