Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme12g00798 | ATGAAACTCTCTATTTCTATTCTTATTTTCTTCTCATTCCTTTTGTTAATATCACCCGCCATTGCTGCCAAGAAGTCTTATGTTGTGTTATTGGGATCTCATTCACATGGGTTAGAAGTTACAGAGAAAGATTTTGAAAGTGTAGTTGATTCCCATCACAAATTACTTGGATCCTTCTTGAGGAGTGATGAAAAGGCAAAAGATTCCATATTTTACTCCTATAAGAAGCATATAAACGGATTTGCAGCAACTCTGGATGACGAAGATGCAACCCGACTTGCAAATCATCCAGAAGTAGCAGCAGTATTGCCAAACAAACCAAAAGATTTATACACAACACATTCATGGGAATTTATGCATTTGGAGAAAAATGGTGTTGTTCCCCCTTCTTCTCCTTGGCGGATGGCTAAATTTGGAAAAGACGTCATTATCGCCAATCTTGACACCGGTGTATGGCCAGAGTCAAAGAGTTTTGGAGAACATGGCATAGATGGACCTGCTCCATCAAAGTGGAAAGGAGCAAAGTACTTCAACAAGGGTTACCTCGAGTACTTGAAATCTGAAAATTCTACTGTTGACCTCTCATCTATCATCAACTCCACTCGTGACTACGACGGTCATGGCTCCCACACACTATCCACAGCTGCTGGCAACTATGTGTTCGGCGCCAGCGTGTTTGGGTCGGGTATCGGAACAGCGAAAGGAGGATCTCCAAAGGCTCGTGTTGCTGCTTATAAGGTTTGTTGGCCATTCGAGCAAGGCGGTTGCTTTGATGCTGACATCACTGAGGCATTTGACCATGCCATCCACGATGGTGTCGACGTTCTTTCACTCTCCCTTGGCGGTGATCCCATCAAATACTCCGAGGATTCCATCGCCATTGCCTCCTTCCATGCAGTGAAGAAGGGAATCCCTGTCGTGTGCGCTGTCGGGAACTCCGGTCCCACACCGAAGACGGCTTCTAATACTGCTCCTTGGATTTTGACTGTTGGTGCAAGTACTTTGGATCGTGAATTTTATGCTCCTGTTGTGCTTCAAAATGGTCATCGCTTCATGGGTTCAAGTCATTCAAAAGGACTAACGGGAAGGAAGCTATACCCATTGATAACCGGAGCTCAGGCAAAAGCGGGTAACGCCAACGAGGACGATGCCATGCTATGCAAGCCCGAAACATTGGACCACTCAAAAGTGAAAGGGAAGATATTGGTTTGCTTGAGAGGAGAAACGGCAAGGTTGGACAAAGGGAAACAAGCGGCCCTTGCCGGTGCTGTTGGAATGATTTTATGCAACGATAAGCTCAGTGGGTCTTCAATCGTCCCCGATTTTCACCTTCTTCCAGCTTCTCATATCAATTACCAAGATGGTCAAGTTCTTCTATCTTACATCAACTCCGCCAGAAATCCAATGGGGTATTTAATCCCACCATTGGCAAAAGTTAACACCAAACCAGCTCCCACTATGGCGGTCTTCTCATCCCGAGGACCCAATACTATTTCACCAGAGATTATCAAGCCTGATGTGACCGCTCCAGGAGTAAACATAATTGCGGCATTTTCAGAAGCTATAAGTCCAACACGCGATGCATCTGACAACAGAACAACTCCATTCATTACAATGTCAGGTACCTCCATGTCTTGCCCCCACGTCGCTGGCCTCGTCGGCCTTCTCCGAAATCTCCACCCGGATTGGAGCCCCTCTGCCATTAAATCTGCCATCATGACCTCCTCCCAAGTTCGTGACAACACATTGAACCCCATGATCGATGGGGGATCTCTTGACCTCGCCCCTGCCACTCCATTTGCATATGGCTCCGGCCACATCAACCCTACTGGAGCCATTGACCCCGGCCTTGTCTACGACCTCTCCCCCAACGACTACTTGGAATTCCTCTGCGCCAGCGGCTACGACGAGAAGACCATTCGTGCATTCTCTGATGAACCTTTCAAATGTCCTCCTGCTTCGTCTGTTTTGAACCTTAATTACCCTTCCATTGGGGTTCAAAATTTGAAAGGTAGTGTGAGTGTCACTAGAAAACTGAAGAACGTTGGCAGTCCGGGAGTTTATAGAGCCCAAATTCTCCACCCCAACGGAGTTGTGGTTTCTGTGAAGCCCAGATTTTTGAAGTTTGAGAGAGTTGGAGAAGAGAAGAGCTTTGAATTGACGCTCGCTGGAGTTGTGCCAAAGGATCGGGTAGGTTACGGCGCTTTGATTTGGAGTGATGGCAGACACGTTGTCAGGAGTCCCATTGTTGTTTCTTCGGGATTATTCTGA | 2271 | 46.9 | MKLSISILIFFSFLLLISPAIAAKKSYVVLLGSHSHGLEVTEKDFESVVDSHHKLLGSFLRSDEKAKDSIFYSYKKHINGFAATLDDEDATRLANHPEVAAVLPNKPKDLYTTHSWEFMHLEKNGVVPPSSPWRMAKFGKDVIIANLDTGVWPESKSFGEHGIDGPAPSKWKGAKYFNKGYLEYLKSENSTVDLSSIINSTRDYDGHGSHTLSTAAGNYVFGASVFGSGIGTAKGGSPKARVAAYKVCWPFEQGGCFDADITEAFDHAIHDGVDVLSLSLGGDPIKYSEDSIAIASFHAVKKGIPVVCAVGNSGPTPKTASNTAPWILTVGASTLDREFYAPVVLQNGHRFMGSSHSKGLTGRKLYPLITGAQAKAGNANEDDAMLCKPETLDHSKVKGKILVCLRGETARLDKGKQAALAGAVGMILCNDKLSGSSIVPDFHLLPASHINYQDGQVLLSYINSARNPMGYLIPPLAKVNTKPAPTMAVFSSRGPNTISPEIIKPDVTAPGVNIIAAFSEAISPTRDASDNRTTPFITMSGTSMSCPHVAGLVGLLRNLHPDWSPSAIKSAIMTSSQVRDNTLNPMIDGGSLDLAPATPFAYGSGHINPTGAIDPGLVYDLSPNDYLEFLCASGYDEKTIRAFSDEPFKCPPASSVLNLNYPSIGVQNLKGSVSVTRKLKNVGSPGVYRAQILHPNGVVVSVKPRFLKFERVGEEKSFELTLAGVVPKDRVGYGALIWSDGRHVVRSPIVVSSGLF | 756 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 14476674 | 14480393 | - | MELO3C026085.2.1 | Cme12g00798 | 344015 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme12g00798 | 756 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 541 | 551 | IPR023828 | - | |
Cme12g00798 | 756 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 115 | 613 | - | - | |
Cme12g00798 | 756 | Gene3D | - | 336 | 480 | - | - | |
Cme12g00798 | 756 | CDD | PA_subtilisin_like | 343 | 472 | - | - | |
Cme12g00798 | 756 | SUPERFAMILY | Subtilisin-like | 111 | 617 | IPR036852 | GO:0004252|GO:0006508 | |
Cme12g00798 | 756 | Pfam | Fibronectin type-III domain | 658 | 751 | IPR041469 | - | |
Cme12g00798 | 756 | PANTHER | PEPTIDASE S8 | 12 | 753 | - | - | |
Cme12g00798 | 756 | PANTHER | BNAC02G33520D PROTEIN | 12 | 753 | - | - | |
Cme12g00798 | 756 | CDD | Peptidases_S8_3 | 110 | 576 | IPR034197 | - | |
Cme12g00798 | 756 | Pfam | Peptidase inhibitor I9 | 26 | 107 | IPR010259 | - | |
Cme12g00798 | 756 | Gene3D | - | 630 | 754 | - | - | |
Cme12g00798 | 756 | Pfam | Subtilase family | 139 | 581 | IPR000209 | GO:0006508|GO:0008236 | |
Cme12g00798 | 756 | Gene3D | Peptidase S8/S53 domain | 141 | 626 | IPR036852 | GO:0004252|GO:0006508 | |
Cme12g00798 | 756 | Pfam | PA domain | 376 | 457 | IPR003137 | - | |
Cme12g00798 | 756 | SUPERFAMILY | Protease propeptides/inhibitors | 25 | 106 | - | - | |
Cme12g00798 | 756 | PRINTS | Subtilisin serine protease family (S8) signature | 540 | 556 | IPR015500 | - | |
Cme12g00798 | 756 | PRINTS | Subtilisin serine protease family (S8) signature | 203 | 216 | IPR015500 | - | |
Cme12g00798 | 756 | PRINTS | Subtilisin serine protease family (S8) signature | 139 | 158 | IPR015500 | - | |
Cme12g00798 | 756 | SUPERFAMILY | PA domain | 392 | 465 | IPR046450 | - | |
Cme12g00798 | 756 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 111 | IPR037045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme12g00798 | Cme-Chr12:14476674 | Cme08g00624 | Cme-Chr8:4015273 | 0 | dispersed | |
Cme12g00798 | Cme-Chr12:14476674 | Cme12g00800 | Cme-Chr12:14495397 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme12g00798 | - | - | csv:101213345 | 1384.01 |