Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00800 ATGAAGCATCCGAAGATGAAGATCTATAATTCCATTCTTATTTTATTTTCACTCCTTTTGGTAATATCACCTGCCATTGCTGCCAAAAAGTCTTATATTGTGTTATTGGGATCCCATTCACATGGATTAGAAGTTAGAGATGAAGATCTTGAAAGGGTGGCTGATTCTCATCACAAATTGCTTGGATCCATCATTGGAAGTGATGAGAAGGCAAGAGATGCTATCTTTTACTCCTATAAGAGGAATATAAATGGTTTTGCAGCAATTATGGATGAGGAAGAGGCAACCCAGCTTGCAAAACACCCGGAAGTAGCAGCAGTATTGCTAAACAAAGCAAAAAAGTTACATACAACACATTCATGGGAGTTTATGCACTTGGAGAAGAATGGTGTAATTCCTCCTTCATCTGCTTGGCGTAGGGCTAAATCTGGAAAAGATGTCATTATCGGCAATCTTGACACTGGTGTATGGGGGGAGTCAAAGAGTTTTGGAGAACATGGGATAGTTGGAGCAGTTCCATCAAAGTGGAAGGGAGGTTGCACTGATAAAACCCCCGATGGAGTGTCATGCAACAGGAAACTAATAGGAGCCAAGTACTTCAACAAGGGCTTTCTCGCCTACTTGAACTCTCAGAACTTGACAGCATCCGTGATCAACTCCACTCGCGACTACGACGGTCATGGTTCACACACCTTGTCCACTGCTGGGGGCAGCTATGTGTCCGGCGCCAGTGTGTTCGGCTTAGGCGTTGGAACTGCCAAAGGGGGCTCTCCCAAGGCCCGTGTTGCCTCTTATAAGGTTTGCTGGCCACTTGAGGATGGAGGTTGTTTCGAAGCCGACATCGCCGAGGCATTTGACCATGCCATTCACGATCGCGTTGATGTTCTTTCGCTCTCCCTCGGTGGCGAGCCAGCCGATTATTATGATGATGGAATCGCCATTGCAGCCTTCCATGCAGTGAAGAAGGGAATCCCTGTGGTGTGCTCGGCTGGTAACTCTGGCCCTGCTGCTCAGACTGTTTCTAATACTGCACCTTGGATTTTGACTGTTGGTGCAAGTACTTTGGATCGTGAGTTTCAGGCTCCTGTTGAGCTCCAAAATGGCCACAGTTACATGGGTTCGAGCCTGTCAAAAGGATTAAAGGGAGACAAGCTTTATCCATTAATAACTGGAGCTGAAGCGAAAGCGAAGAACGCCACCGCGGAGGTGGCCATGCTTTGCAAACCAAAAACATTGGATCATTCAAAAGTGAAAGGGAAGATATTGGTTTGCTTGAGAGGAGACACTGCAAGAGTAGACAAAGGAGAACAAGCGGCCCTTGCCGGTGCTGTCGGAATGATTCTATGCAATGATAAGCTAAGTGGGTTCGAAACCATCGCAGATCCCCATGTTCTTCCAGCTTCCCATATCAATTACAATGATGGCCAAGCTGTTTTCTCTTACATCAAATCCACCAAAAATCCGATGGGGTCTTTAATCCCACCATCGGCTAAAGTTAACACCAAACCTGCCCCCAGTATGGCAGCCTTTTCATCTCGAGGACCCAACCTTATTTCCCCTGAGATTATCAAGCCAGATGTGACTGCCCCGGGTGTGAATATAATTGCAGCATTCTCAGAGGCCGTAAGCCCAACAGGCGAACCATTTGACAATAGAACAGTTCCATTCATAACAATGTCAGGCACCTCCATGTCTTGCCCCCATGTCTCTGGTCTTGTCGGCCTTCTTAGAACTCTCCACCCTCACTGGAGCCCCTCCGCCATCAAATCTGCCATCATGACCTCTGCTAGAATTCGTGACAACACTAAGAAACCCATGCTCGATGGTGGCTCCCCTGACCTCGCCCCTGCCACCCCCTTTGCCTATGGCTCTGGCCACATTCGCCCTACTGGAGCCATTGACCCCGGCCTCGTCTATGATCTCTCCCCCAATGACTACTTGGAATTCCTTTGCGCCAGTGGCTACAACGAGAAGACCATTCAAGCATTCTCTGATGGCCCTTTCAAATGTCCAGCTTCTGCTTCTATTTTGAACTTCAATTATCCTTCCATCGGGGTTCAGAATTTGACTGGCAGTGTCACCCTCACTAGGAAATTGAAGAACGTTAGCACTCCTGGGGTATACAAAGCTAGAGTGATGCACCCCAATGGAGTTAAGGTTTTAGTGAAGCCCAAAGTTTTGAAGTTCGAGAGAGTTGGAGAGGAGAAAAGATTTGAATTGATAATAACTGGAGATGTGCCAGAGAATCAGGTTGTTGACGGCGTGCTGATTTGGACTGATGGGAAGCACTTTGTTAGGAGTCCCATTGTCGTTTCCTCTGGCTTGTTTTGA 2331 47.32 MKHPKMKIYNSILILFSLLLVISPAIAAKKSYIVLLGSHSHGLEVRDEDLERVADSHHKLLGSIIGSDEKARDAIFYSYKRNINGFAAIMDEEEATQLAKHPEVAAVLLNKAKKLHTTHSWEFMHLEKNGVIPPSSAWRRAKSGKDVIIGNLDTGVWGESKSFGEHGIVGAVPSKWKGGCTDKTPDGVSCNRKLIGAKYFNKGFLAYLNSQNLTASVINSTRDYDGHGSHTLSTAGGSYVSGASVFGLGVGTAKGGSPKARVASYKVCWPLEDGGCFEADIAEAFDHAIHDRVDVLSLSLGGEPADYYDDGIAIAAFHAVKKGIPVVCSAGNSGPAAQTVSNTAPWILTVGASTLDREFQAPVELQNGHSYMGSSLSKGLKGDKLYPLITGAEAKAKNATAEVAMLCKPKTLDHSKVKGKILVCLRGDTARVDKGEQAALAGAVGMILCNDKLSGFETIADPHVLPASHINYNDGQAVFSYIKSTKNPMGSLIPPSAKVNTKPAPSMAAFSSRGPNLISPEIIKPDVTAPGVNIIAAFSEAVSPTGEPFDNRTVPFITMSGTSMSCPHVSGLVGLLRTLHPHWSPSAIKSAIMTSARIRDNTKKPMLDGGSPDLAPATPFAYGSGHIRPTGAIDPGLVYDLSPNDYLEFLCASGYNEKTIQAFSDGPFKCPASASILNFNYPSIGVQNLTGSVTLTRKLKNVSTPGVYKARVMHPNGVKVLVKPKVLKFERVGEEKRFELIITGDVPENQVVDGVLIWTDGKHFVRSPIVVSSGLF 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 14495397 14499437 - MELO3C026084.2.1 Cme12g00800 344017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00800 776 PANTHER BNAC02G33520D PROTEIN 14 773 - -
Cme12g00800 776 PANTHER PEPTIDASE S8 14 773 - -
Cme12g00800 776 Gene3D - 650 774 - -
Cme12g00800 776 CDD PA_subtilisin_like 363 492 - -
Cme12g00800 776 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Cme12g00800 776 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 116 IPR037045 -
Cme12g00800 776 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Cme12g00800 776 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Cme12g00800 776 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Cme12g00800 776 Pfam Fibronectin type-III domain 678 771 IPR041469 -
Cme12g00800 776 Pfam Peptidase inhibitor I9 31 115 IPR010259 -
Cme12g00800 776 SUPERFAMILY Subtilisin-like 115 637 IPR036852 GO:0004252|GO:0006508
Cme12g00800 776 ProSiteProfiles Serine proteases, subtilase domain profile. 120 633 - -
Cme12g00800 776 Pfam PA domain 403 477 IPR003137 -
Cme12g00800 776 Gene3D - 356 500 - -
Cme12g00800 776 CDD Peptidases_S8_3 113 596 IPR034197 -
Cme12g00800 776 SUPERFAMILY PA domain 414 485 IPR046450 -
Cme12g00800 776 Gene3D Peptidase S8/S53 domain 146 646 IPR036852 GO:0004252|GO:0006508
Cme12g00800 776 Pfam Subtilase family 144 602 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme06g02720 Cme-Chr6:34411012 Cme12g00800 Cme-Chr12:14495397 0 dispersed
Cme06g02725 Cme-Chr6:34449723 Cme12g00800 Cme-Chr12:14495397 0 dispersed
Cme12g00800 Cme-Chr12:14495397 Cme10g01524 Cme-Chr10:19274980 0 dispersed
Cme12g00798 Cme-Chr12:14476674 Cme12g00800 Cme-Chr12:14495397 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00800 - - csv:101213582 1410.2