Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g00903 ATGGGGTTTTCTTCAATAATAATAACAATAATACTTGCTATTGTTATTTTATTTTATGTAATTAGTTTTGATCATCTTGTTTCTTGTTATGCAGAAAAGAGAGAAATTTTCTTAGTTGTAATGGAAGATGACGGTGGGTATGAATTAAGAAACAGCAAAGAAATGTTGTCAATAGAAGATTCACACAAGAAGGTTTTAGAAAACAGCATAAAAAACTACAGAAAACTGCATAGCTTCAAGAAAATTTTGAATGGTTTTGCAGTCCACACAACACCATCAGAAGCTTCAAAGCTTAGAGAAGCTAATGGAGTGAAATTGGTTGAGTTAGATAGAGGAGTGAAGAAAATGACGACCTATACCCCTGAGTTTTTAGGGTTAGTGAAGAATAATAATGATTATAAATATAATTATAGTGGTGGTATTAGTGGTGCTGGCGGGGATGGGATTTTGATTGGGTTTGTGGATTCTGGGATTTATCCAAAACATCCAAGTTTTAGTAATAACTTTGGTAAAGATGATGATGATTATGGTGAGTTGGTTTGTGAAGAAGGTCCTTTATTTCCAAAAGGTTGCTGCAATGGGAAGATAGTAAGTGCTATGTTTTTCTCTGCTGGGGCTCAGGCTGCTGCAGTGCTTAATTCTTCTATTGATTTCCTATCTCCATTTGATGCTGAAGGGCATGGAAGCCACGTCGCATCCATAGCTGCTGGGAATGCAGAAGTTCCAGTTATTGTCGATGGTTTCTTCTACGGATTGGCCTCTGGGATTGCGCCACATGCCCGAATTGGTGTTTACAAGGCAGTGTATCCAACCATAGCAACTCTAACAGATGTAATTTCAGCAATAGATCAAGCAGTGATTGATGGAGTTGATATATTAGCATTATCAGTTGGACCAAATGAACCACCAGAGGTGGGATTTACCTTCCTAAGCATATATGACATTGCCATATTATCTGCTACAAGAGCTGGAATCCTTGTTGTTCAAGCGGCCGGAAATAATGGTCCGGCACGGGCAACTGTTGTCTCTTATAGCCCTTGGGCCATCGGCGTCGCAGCTTCCGGCACCGACAGAGTTTATTCATCCTCACTTCTTCTTGGCAATGGCCAAAAAATTGGAGGAGTAGGAATGTCTGGACCCAGTTTAGGGAGTGAGTTTTTCCTACATAAGTTGGTATTGGCTAAGGATGCAAAGATGCAAAATGAGACACAATATGACGACATACCAAGTTACATTGAAGAATGCCAAAATCCTGAAGCTTTTGACCCAAATATTGTCCAAAACAGCATAGTCCTTTGCTCTTTCTCACAAGGATTCCTCAATGGAACCTCCTCTCTTGCAGCCATTATTCACACTGCAAAAAAACTCAAATTCATGGGTTTTGTTCTCATTGCAAATCCAAACTATGGTGATTTCATTGCAGAGCCTATCCCTTTCAGAGTTCCCGGTATTCTCGTCCCCAGCGTATCAGATACTCAGGTAATACTGAAGTACTATGAAGAAAATACATGCAAGGATGGAAGAGGAATGGTTAGAGAGTTTAAAGGGAAAGCAGGCATTGGAGAAGGAAGAATTGCTTCATTTGGAAAGGAAGCACCCACAGTAAGCAGATTTTCATCAAGAGGACCAGATTACATAAACATAAATAGGAGTTTAGCTGATGTTCTAAAGCCTGATATTCTTGCACCTGGTCACCAAATTTGGGCTGCTTGGAGCCCTCTCAGTGCCTCAGAACCACTATTGAAGGGATACCGTTTTGCACTGATGTCTGGAACAAGTATGGCAGCACCTCATATTGTGGGAGTAGCAGCACTTATCAAGCAAAAGTATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCTATGTCCACAACTGCTACAAAGTATGATATGAATGGAGACCTTATTCAGGCTGAGGGATTCAACCTTCATGCTTTATATCCTTCTACTCCCTTTGATTTCGGCGCTGGGCTCGTTTCTCCGACCAACGCTTTGGACCCCGGACTCGTCTTCCCAACA 2019 41.01 MGFSSIIITIILAIVILFYVISFDHLVSCYAEKREIFLVVMEDDGGYELRNSKEMLSIEDSHKKVLENSIKNYRKLHSFKKILNGFAVHTTPSEASKLREANGVKLVELDRGVKKMTTYTPEFLGLVKNNNDYKYNYSGGISGAGGDGILIGFVDSGIYPKHPSFSNNFGKDDDDYGELVCEEGPLFPKGCCNGKIVSAMFFSAGAQAAAVLNSSIDFLSPFDAEGHGSHVASIAAGNAEVPVIVDGFFYGLASGIAPHARIGVYKAVYPTIATLTDVISAIDQAVIDGVDILALSVGPNEPPEVGFTFLSIYDIAILSATRAGILVVQAAGNNGPARATVVSYSPWAIGVAASGTDRVYSSSLLLGNGQKIGGVGMSGPSLGSEFFLHKLVLAKDAKMQNETQYDDIPSYIEECQNPEAFDPNIVQNSIVLCSFSQGFLNGTSSLAAIIHTAKKLKFMGFVLIANPNYGDFIAEPIPFRVPGILVPSVSDTQVILKYYEENTCKDGRGMVREFKGKAGIGEGRIASFGKEAPTVSRFSSRGPDYININRSLADVLKPDILAPGHQIWAAWSPLSASEPLLKGYRFALMSGTSMAAPHIVGVAALIKQKYPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNLHALYPSTPFDFGAGLVSPTNALDPGLVFPT 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15866560 15878004 + MELO3C021725.2.1 Cme12g00903 344120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g00903 673 Gene3D - 357 528 - -
Cme12g00903 673 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 54 671 IPR045051 -
Cme12g00903 673 Pfam Peptidase inhibitor I9 38 114 IPR010259 -
Cme12g00903 673 ProSiteProfiles Serine proteases, subtilase domain profile. 121 665 - -
Cme12g00903 673 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Cme12g00903 673 PRINTS Subtilisin serine protease family (S8) signature 590 606 IPR015500 -
Cme12g00903 673 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Cme12g00903 673 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 115 IPR037045 -
Cme12g00903 673 PANTHER SUBTILISIN-LIKE PROTEASE SBT2.6 54 671 - -
Cme12g00903 673 ProSitePatterns Serine proteases, subtilase family, histidine active site. 227 237 IPR022398 -
Cme12g00903 673 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 151 162 IPR023827 -
Cme12g00903 673 CDD PA_subtilisin_like 363 503 - -
Cme12g00903 673 Pfam Subtilase family 146 630 IPR000209 GO:0006508|GO:0008236
Cme12g00903 673 ProSitePatterns Serine proteases, subtilase family, serine active site. 591 601 IPR023828 -
Cme12g00903 673 Gene3D Peptidase S8/S53 domain 148 671 IPR036852 GO:0004252|GO:0006508
Cme12g00903 673 SUPERFAMILY Subtilisin-like 116 669 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00050 Cme-Chr8:397288 Cme12g00903 Cme-Chr12:15866560 3.63E-140 dispersed
Cme12g00903 Cme-Chr12:15866560 Cme11g00387 Cme-Chr11:3917870 1.34E-77 dispersed
Cme12g00903 Cme-Chr12:15866560 Cme03g02092 Cme-Chr3:28252992 6.68E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g00903 - - csv:101204623 1230.7