Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01111 ATGGATAATGGTGATATTGAGAGTGGGGAAGAGGAATTTCATGGTCAGAGGGGTAGGAAGTATCGTCCTGTTGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCTATGGATCCGGGTTCCTCTTCTTCTTCTTCCTCTATTCCACCCATACGCCATCCTTCTCTCAAGAAGGTAAAAGTGGGCTCTCAGACAGGTACTGAAAAAGATGGGAACTCTCCTACTCGTATTGAAGTCAATGGCCCCCAGCGAGAATCGAAACTGGAGTTTTTTGGTTTTGATTCTCTTGTTAATATTCTTGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCGCCTTCTAGTCCTCGGGATGGTGAGAATGTTTCTATGACTCAAGGGTTGCCAAAGGTAAACTATCTGAACTTGCATTATCGTGTTGTTTTCCTTGCTGTTCTCCATTTAGACACACAACCTAATTCACAAACCTTCTTGGCCTTGGAGGGCTTGGATTGGCAACCACGAGAGTGGCTAGAGAGATCATCTCCCTTGAGGAAATTGGCTATGTGGTTATCAGATTTGAGAGGAGTAAAGCTTCAGGCTCTGATGGTTTTTTCTGGCCTTCTTTCAAGAAAGTTGGGACACGAGATGGATTTTTTTAAGGGGCCTGGACCTTTGCTATTGGCCTTCATTTGTAGGCCTTATTCCTACAACATTGTTCTAAAGAGTTCTCCAACTCTTAGGATCGTTGGGATGGCTGGCATTGGTGAGTCATTAGTACTGGTGGCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATTTCGCTAAGTGCTATTGCAACTAATGGTGCTATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGTCTAAATGTGCACCACCTCTGTGTATCATCATAACTTCTGACTTCTCCTCAATTTGGTGGTTCAGTTATGTGTTGGGAGCTGTAGAAACATTTTTGAATGCTGTACCAGCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGAACAACCGTCGAGCCAATACAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACGATTCTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGAGTTGCTCCTGCTTTCCTGATTCCAGTTTTGTTCTCAGTACTTTGCATATTTCTTGGAGTTTTTCTGGCAGGAAAAAACGACCCTACAGAGGGTGTCACAGGCTTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACCAACAGTGCTGGAATTCCTGATCCTCTAGGAAAAGTATATTGGAATTTCAATGCATTGGTTGGGCTGTTTTTCCCTGCTGTGACGGGAATAATGGCTGGTTCTAATAGATCAGCTTCACTGAAGGATACTCAGCGTTCAATTCCCATTGGAACATTGGCTGCAACTTTAACAACAACTGCATTGTATCTGGTCTCTGTTTTGCTGTTTGGAGCACTGGCAACCAGAGAGAAATTGTTGACGGATAGGCTTCTTACTGCTACGGTTGCTTGGCCTTTCCCAGCAATTATTTATGTTGGAATTATTTTATCAACTCTTGGAGCTGCCCTTCAGAGCCTGACAGGAGCCCCTCGCTTACTAGCAGCCATAGCCAATGATGATATATTGCCTATCCTAAACTATTTTAAAGTAGCAGATGGCAGCGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCTTACTGTGTTATGCTGGTGTTAACTTATCCTGCTTCCTTTTGGATTTACTTGACGCTCCCAGTTGGCGTCCTCGTTGGAGATTCCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATAATGTTCTTGATCTCGTGGTCTTTCACGATAGTGTCTTTGGCCCTTGCAAGCCTGATATATTATTATGTCTGCCTTAGAGGTAAGGCTGGAGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGTAGTCTTCGTTCGCTTGGAGCGAGCCAAGTCCACCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCATGGGGAAAGCTGCCGGAAAACGTACCCTGTCACCCTAAACTTGCAGACTTTGCTAACTGCATGAAGAAAAAAGGCCGTGGAATGTCCATATTTGTTTCCATTTTAGATGGAGATTACCATGAACGAGTTGAAGATGGAAAAGCTGCCTGCAAGCAGCTTGCTACCTATATTGATTACAAACGTTGTGAAGGTGTGGCAGAGATTGTTGTGGCTCCCACGATGTCTGAAGGTTTCCGAGGGATCGTTCAAACGATGGGTCTTGGAAATCTCAAGCCGAATATTGTAGTCATGCGATACCCTGAAATATGGCGTCGTGAAAATCTAACAGAAATTCCGGCTACTTTTGTTGGAATTATCAATGACTGCATTGATGCTAACAAGGCAGTTGTGATTGTTAAGGGTCTGGATGAATGGCCAAATGAATTTCAAAGGCAATATGGAACTATAGATTTGTACTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATAGCAGAGGAGGATTCTGATGCCGAAGGCCTCAAAGCTGACGTCAAAAAGTTTTTGTATGATCTACGAATGCAAGCTGAGGTGATTGTTATAACGATAAAGTCATGGGACACACAAGTGGAGGGCGCGCAACAAGACGAATCGATGGAAGCCTTCACCGCGGCCCAAGGGAGGATTGCTAGTTATTTAAGTGAAATGAAGGCAACAGCCGAGAGCAGAGGAACCACACTCATGGCTGATGGCAAGCCTGTTAGTGTGAATGAGCAGCAGGTCGAGAAGTTTCTAAATACAACTCTCAAGTTGAACTCAACAATTCTGAGATACTCGAGGATGGCTGCGGTCGTGCTCGTCAGTCTTCCACCACCTCCTGTCAACCATCCTGCATACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAATGTGCCTAGGCTCTTGATCGTAAGAGGATACCGTCGAGACGTCGTAACTTTGTTCACTTAG 3195 43.97 MDNGDIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGSSSSSSSIPPIRHPSLKKVKVGSQTGTEKDGNSPTRIEVNGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSMTQGLPKVNYLNLHYRVVFLAVLHLDTQPNSQTFLALEGLDWQPREWLERSSPLRKLAMWLSDLRGVKLQALMVFSGLLSRKLGHEMDFFKGPGPLLLAFICRPYSYNIVLKSSPTLRIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPESKCAPPLCIIITSDFSSIWWFSYVLGAVETFLNAVPAAGIFRETVTKVNGTTVEPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVLCIFLGVFLAGKNDPTEGVTGLSLESFKENWSSDYQMTNSAGIPDPLGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTALYLVSVLLFGALATREKLLTDRLLTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDGKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGAQQDESMEAFTAAQGRIASYLSEMKATAESRGTTLMADGKPVSVNEQQVEKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT 1064
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19038686 19052420 - MELO3C002803.2.1 Cme12g01111 344328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01111 1064 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 13 131 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cme12g01111 1064 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 242 1063 IPR004842 GO:0006811|GO:0015377|GO:0016021
Cme12g01111 1064 MobiDBLite consensus disorder prediction 36 51 - -
Cme12g01111 1064 Gene3D Amino acid/polyamine transporter I 232 681 - -
Cme12g01111 1064 MobiDBLite consensus disorder prediction 8 32 - -
Cme12g01111 1064 MobiDBLite consensus disorder prediction 1 81 - -
Cme12g01111 1064 MobiDBLite consensus disorder prediction 60 80 - -
Cme12g01111 1064 Pfam Solute carrier family 12 864 1063 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cme12g01111 1064 Pfam Solute carrier family 12 733 854 IPR018491 GO:0006811|GO:0016020|GO:0022857
Cme12g01111 1064 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 13 131 - -
Cme12g01111 1064 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 242 1063 - -
Cme12g01111 1064 Pfam Amino acid permease 242 699 IPR004841 GO:0016020|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01111 K14427 - csv:101216218 1541.55