Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01244 ATGGTAGTTGAAGATTCGATGAAAGCTACATCGGCGGAAGATCTTTCTAATTCCATTGCTAATCAAAACCCTAGAGGACGTGGCGGTGACGAAGATGAGGAACTTGAGGAAGGTGAGATCGTCGGCGACGACGACCTCGACTCCTCCAATTTGTCCGCGTCCCTAGTGCATCAGCCTCACCCTCTGGAGCACTCTTGGACCTTTTGGTTCGATAACCCATCTGCCAAATCCAAGCAAGCCACCTGGGGTGCGTCTATTCGACCGATCTATACCTTCTCTACCGTCGAGGAGTTCTGGAGTGTTTACAACAACATTCATCATCCAAGCAAATTGGCGATGAGGGCAGATTTGTACTGCTTCAAACATAAAATTGAGCCTAAATGGGAAGATCCCGTTTGTGCTAATGGAGGGAAATGGACTGTGAACTTTCCAAGGGGAAAATCTGATAATGGCTGGTTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGACTGTGGTGATGAAATTTGTGGAGCAGTTGTTAATGTTAGGTCTGGGCAGGATAAAATATCAATTTGGACGAAGAATGCTTCCAATGAAGCTGCGCAGGCGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTACAATGAGAGCATTGGCTTTATATTCCACGATGACGCAAAGAAATTCGATAGACTTGCGAAGAATAAATATATGGTGTGA 708 45.48 MVVEDSMKATSAEDLSNSIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSASLVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLYCFKHKIEPKWEDPVCANGGKWTVNFPRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNESIGFIFHDDAKKFDRLAKNKYMV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 20590164 20593495 + MELO3C002698.2.1 Cme12g01244 344461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01244 235 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cme12g01244 235 Gene3D RNA Cap, Translation Initiation Factor Eif4e 51 235 IPR023398 -
Cme12g01244 235 MobiDBLite consensus disorder prediction 1 52 - -
Cme12g01244 235 MobiDBLite consensus disorder prediction 10 24 - -
Cme12g01244 235 Pfam Eukaryotic initiation factor 4E 61 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cme12g01244 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 3 235 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cme12g01244 235 SUPERFAMILY eIF4e-like 56 227 IPR023398 -
Cme12g01244 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 3 235 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01805 Cme-Chr4:25753993 Cme12g01244 Cme-Chr12:20590164 5.92E-34 dispersed
Cme05g00608 Cme-Chr5:6258410 Cme12g01244 Cme-Chr12:20590164 9.00E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01244 K03259 - csv:101206312 449.514