Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01489 ATGGGTTCCAAAACACTGTGTTTCTTCTTCTTTCTTTTCTTTGTGGCTGTTTCTTTCAAGTATGCTTCAGCACATGATGAGGAAGACAATGGTCTTGTTATGAATTTTTACAAAGATACATGTCCCCAAGCTGAAGATATCATCAAAGAACAAGTTAGGCTTCTCTACAAGCGCCATAAGAACACTGCATTCTCTTGGCTTAGAAATATTTTCCATGACTGTGCTGTTCAATCCTGTGATGCCTCTCTGCTGCTGGATTCAACAAGAAGAACCCTGTCAGAGAAGGAAACAGACAGAAGCTTTGGACTTAGGAACTTCCGGTATATAGAGACCATTAAAGAGGCGGTGGAAAGAGAATGCCCTGGAGTTGTCTCCTGTGCAGATATCCTTGTTCTGTCAGCCAGAGATGGCATTGTTTCTCTTGGGGGGCCTTACATCCCACTTAGAACAGGCAGAAGAGATGGAAGAAAAAGCAGAGCTGATATTTTGGAAAACTATCTTCCAGACCACAATGAAAGCATGTCTGTTGTCCTTGAAAGATTTGCTGCCATGGGTATTGACACCCCTGGAGTGGTTGCTTTACTAGGAGCTCATAGTGTTGGTAGAACACACTGTGTGAAGCTGGTGCACCGGCTGTACCCACAAGTAGACCCTGTGCTGAACCCTGGCCATGTAGAGCACATGTTGTACAAGTGTCCTGATGAAATCCCAGACCCCAAGGCTGTACAGTACGTGAGGAATGATCGTGGTACACCGATGATTCTGGACAACAACTACTATAGAAACATACTTGACAACAAAGGACTGCTGATTGTGGACCATCAACTAGCCACAGACAAGAGAACAAAGCCATATGTGAAGAAAATGGCCAAAAAGCAAGACTATTTCTTCAAGGAATTCTCAAGAGCCATTACCATCCTTTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAAATCAGGAAGCAGTGTAATGTTGCCAACAAGCTGCACTGA 996 44.18 MGSKTLCFFFFLFFVAVSFKYASAHDEEDNGLVMNFYKDTCPQAEDIIKEQVRLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVSLGGPYIPLRTGRRDGRKSRADILENYLPDHNESMSVVLERFAAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPQVDPVLNPGHVEHMLYKCPDEIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLATDKRTKPYVKKMAKKQDYFFKEFSRAITILSENNPLTGTKGEIRKQCNVANKLH 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22519596 22521851 - MELO3C002457.2.1 Cme12g01489 344706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01489 331 PANTHER PEROXIDASE 25-RELATED 20 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 Pfam Peroxidase 49 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 ProSiteProfiles Plant heme peroxidase family profile. 31 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 Gene3D - 35 328 - -
Cme12g01489 331 PANTHER PEROXIDASE 42 20 327 - -
Cme12g01489 331 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cme12g01489 331 Gene3D Peroxidase, domain 2 168 307 - -
Cme12g01489 331 CDD secretory_peroxidase 31 326 IPR033905 GO:0004601|GO:0042744
Cme12g01489 331 SUPERFAMILY Heme-dependent peroxidases 32 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g02323 Cme-Chr8:30160368 Cme12g01489 Cme-Chr12:22519596 2.32E-126 dispersed
Cme12g01489 Cme-Chr12:22519596 Cme03g00128 Cme-Chr3:1727623 3.30E-64 dispersed
Cme12g01489 Cme-Chr12:22519596 Cme04g02541 Cme-Chr4:31630075 4.23E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01489 K00430 - csv:101214168 649.432