Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01515 ATGCCACTCCCTCATTGCTACTCTGTTTTAGTCCTCACTCTGTTTCTCTTCACGACCCCATCTCACTCCACCAAATGCCGAACTTCCTGCGGCCCAATCCAAATCAACTACCCATTTGGTATCGACGACGGCTGTGGCAGCCCCTACTACCGCCACATCCTCGACTGTACCGACTCTGGCAAGCTTGAATTGAGAACTCCATCAGGGAGATACCCAATTGAAAGCATAAGCTACACAGAACGCCACATCAAAATCACTGACCCTTACATGTGGAACTGCGACGACGGCGATAACTTCCGCCCCACGAGACCATTCAGCCTCGACACAAGCACCCATCTCTCGCTTTCCTCCCAAAACGACTACTTATTCTTCAACTGCAGTGAGGACAATGTAATTGTGGCTCCTAAGCCAATGTTCTGCGAGCGGTTTCCAGAGCGGTGTGATTCGTCCTGCGACAGTGCGAGCTATCTATGCAGACACTTGCCGGAATGCAGCGGGGGTTTGGGGGCGGCGTCTTGCTGTTCGTATTATCCAAAGGCGACAGAATCGTTGAGGCTGATGCTGAAGTACTGTTCTAGCTATACAAGTGTGTATTGGAAGAGCATTGGGGCACCGGATCAGCCGTATGATCAGGTTCCGGAATATGGGATAAGGGTTGATTTTGATATCCCAGTGTCGACGAGGTGTTTGCATTGTCAAGATATGGTGAGAGGAGGAGGAACTTGTGGATTTGATACGCAAAGTCAGGGTTTCTTGTGCCTCTGTGGTGAACGGAATGTTACTACTTTTTGTGGAGGGACGGCAGCGGCAGTGTCGGCTGCCGGGGTGTTCGTAGTTGCGGCGGCTGTAATATGGTTTGTAAGAAGAGTAAGAGCCAAAGCTCCAGTAACCTGCGGGGTTCAAAGCAATGACAATAGGCTTTTTTGA 927 50.49 MPLPHCYSVLVLTLFLFTTPSHSTKCRTSCGPIQINYPFGIDDGCGSPYYRHILDCTDSGKLELRTPSGRYPIESISYTERHIKITDPYMWNCDDGDNFRPTRPFSLDTSTHLSLSSQNDYLFFNCSEDNVIVAPKPMFCERFPERCDSSCDSASYLCRHLPECSGGLGAASCCSYYPKATESLRLMLKYCSSYTSVYWKSIGAPDQPYDQVPEYGIRVDFDIPVSTRCLHCQDMVRGGGTCGFDTQSQGFLCLCGERNVTTFCGGTAAAVSAAGVFVVAAAVIWFVRRVRAKAPVTCGVQSNDNRLF 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22682939 22685201 - MELO3C002430.2.1 Cme12g01515 344732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01515 308 PANTHER WALL-ASSOCIATED RECEPTOR KINASE, GALACTURONAN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 9 283 - -
Cme12g01515 308 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 9 283 - -
Cme12g01515 308 Pfam Wall-associated receptor kinase galacturonan-binding 26 87 IPR025287 GO:0030247
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cme08g00422 Cme12g01515 CCT
Cme08g00439 Cme12g01515 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme08g00422 Cme-Chr8:2579753 Cme12g01515 Cme-Chr12:22682939 4.04E-128 dispersed
Cme12g01515 Cme-Chr12:22682939 Cme12g01686 Cme-Chr12:23775985 4.43E-23 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01515 - - csv:101213294 594.349