Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01536 ATGACTTCAAGAGTGGAAACCGATGATGATTGTGAAATGAAGGGAAGTATGTGGGTTCTGGATCAGAAGCTTGATCAGCCTATGGATGAAGAAGCTGGGAGACTTAGTAATATGTACAAAGAGAAGAAATTCTCGGTATTGTTGCTTCTTCGACTTGCATATCAAAGCCTTGGAGTGGTTTATGGAGATTTGGGGACTTCTCCCCTGTACGTATTCTACAATACATTTCCTCGTGGGATTTCTGATCCAGAGGATGTAGTTGGAGCACTTTCATTGATTATATACTCTCTCACTCTCATTCCACTCATAAAGTATGTATTTATCGTGTGTAAAGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTCTACTCCTTGTTGTGTCGTCATGCAAAAGTTAAAACTATCCCAAACCAACATAGAACTGATGAGGAGCTAACAACATATAGCCGCTCTAAATTTCATGAGCAATCATTTGCTGCTAAGACTAAACGATGGCTTGAAAAACAGTCATCCAGGAAGAATGCTTTGCTCATTCTTGTCCTCGTTGGCACTTCCATGGTAGTTGGAGATGGAATTCTCACTCCGGCAATATCAGTTTTATCTGCAGCGGGAGGGATCAAAGTAAACCACCCCCATGTGAGCAGTGATGTAGTTGTGCTTGTTGCTGTTGTGATACTAGTAGGATTATTCAGCTTGCAACGTTATGGTACTGATAGAGTTGGTTGGCTCTTTGCTCCAGTTGTCCTACTCTGGTTTCTTTTAATTGGAGGTATAGGCATGTTCAACATCTGGAAATATGATAAAACCATTCTAAGAGCCTTTTCACCTGTGTATATTGTTCGATATTTTAGAAGGCGAGGGATGGATGGTTGGACATCCCTCGGAGGTGTGCTGCTGAGTATAACAGGCACAGAGGCTCTATTTGCCGATCTGGCTCATTTTCGTGTAGCAGCTGTTCAAATTGCTTTTACAGTAGTTGTTTTTCCTTGCCTTCTCTTGGCATATTCTGGACAGGCTGCCTACCTTATGAACAATACGGATCATGTGGTTGATGCCTTCTATCGTTCAATCCCAGAATCCATATACTGGCCCGTGTTTGTTGTTGCAACTGCTGCTGCTGTAGTTGCTAGTCAAGCCACTATATCTGCAACATTTTCAATTATCAAGCAGGCTCTTGCTCATGGCTGTTTTCCAAGAGTTAAAGTTGTTCATACCTCAAAGAATTTTCTTGGTCAGATATATGTTCCAGATATTAACTGGATTCTCATGATTCTTTGTATTGCTGTGACAGCAGGATTTAAGAATCAAAGTCAAATTGGAAATGCTTATGGGACAGCGGTTGTGGTAGTCATGCTTGTAACCACACTGCTCATGATTCTAATCATGATCTTGGTGTGGCGCTGTCATTGGGTCATCGCCTTGATTTTCACCGGACTGTCACTTGTTGTGGAGTGCAGTTACTTCTCTGCTGTTCTCTTCAAGGTTGATCAAGGTGGCTGGGTCCCCCTTGTGATTGCCGGAGCCTTTCTTATCATCATGTATGTGTGGCATTATGGAACTGTTAAACGATACGAATTTGAGCTGCACAGTAAAGTTTCAATGGCATGGGTTCTCGGGCTTGGTCCTAGTCTAGGACTAGTCCGTGTTCCAGGAATTGGACTTGTGTATACTGAGCTAGCAAGCGGTGTACCTCACATATTTTCCCATTTCATTACGAATCTTCCTGCCATCCATTCTGTTGTTGTGTTTGTCTGTGTGAAATATCTTCCGGTCTACACAGTGCCAGAGGAAGAACGGTTCCTTGTAAAGCGGATAGGACCGAAGAACTTCCACATGTTTCGATGTGTTGCTAGATATGGTTATAAAGACCTCCACAAAAAGGATGATGATTTTGAGAAAAAGCTTTTCGATAGCATCTTCCTTTTTGTCAGGCTTGAATCCATGATGGAAGGTTGTTCAGACTCTGATGAGTACAGTTTGTATGGCCAGCAAACTGAGCATTCTAGGGATGGCTTGTTGATTGGCAACCATGGAAATGAAGCTTCACTCAATGTGGACACATTCTCTTCAGTTGACTCAATCGTGCCCGTTAGATCTCCGATGCATATAAATAACACGGTAAGATCATCAGAGCGAGCAAGCAACCATACCGATAGCGATGAGATTGAATTCTTGATTAGGTGTAGAGATGCTGGGGTGGTGCACATACTGGGAAACACTGTAATTAGAGCAAGAAGGGAATCAAAATTCTACAAAAAGATAGCTGTGGATTACGTATATGCGTTTCTTAGGAAGATTTGCAGGGAGCATAGTGTGATTTTCAATGTTCCTCATGAGAGTCTATTAAACGTTGGCCAAATTTTCTATGTATAG 2376 42.13 MTSRVETDDDCEMKGSMWVLDQKLDQPMDEEAGRLSNMYKEKKFSVLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPRGISDPEDVVGALSLIIYSLTLIPLIKYVFIVCKANDNGQGGTFALYSLLCRHAKVKTIPNQHRTDEELTTYSRSKFHEQSFAAKTKRWLEKQSSRKNALLILVLVGTSMVVGDGILTPAISVLSAAGGIKVNHPHVSSDVVVLVAVVILVGLFSLQRYGTDRVGWLFAPVVLLWFLLIGGIGMFNIWKYDKTILRAFSPVYIVRYFRRRGMDGWTSLGGVLLSITGTEALFADLAHFRVAAVQIAFTVVVFPCLLLAYSGQAAYLMNNTDHVVDAFYRSIPESIYWPVFVVATAAAVVASQATISATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYVPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVVVMLVTTLLMILIMILVWRCHWVIALIFTGLSLVVECSYFSAVLFKVDQGGWVPLVIAGAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDSIFLFVRLESMMEGCSDSDEYSLYGQQTEHSRDGLLIGNHGNEASLNVDTFSSVDSIVPVRSPMHINNTVRSSERASNHTDSDEIEFLIRCRDAGVVHILGNTVIRARRESKFYKKIAVDYVYAFLRKICREHSVIFNVPHESLLNVGQIFYV 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22831842 22838436 + MELO3C002409.2.1 Cme12g01536 344753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01536 791 Pfam K+ potassium transporter 54 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g01536 791 TIGRFAM kup: potassium uptake protein 52 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g01536 791 PANTHER POTASSIUM TRANSPORTER 2 790 - -
Cme12g01536 791 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g01536 Cme-Chr12:22831842 Cme12g01537 Cme-Chr12:22839730 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01536 K03549 - csv:101217915 1489.94