Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01537 ATGGCGTCAGGATTCGAGACTGGTGATTATACAAACGATAAAGATAATAGTATCTGGGTTTTAGATCGCCAGATAGACCAGTCAATGGAGGAGGAGTCTAAGCGGCTAAGAAATGTGCATCAGGAAAAGGATCATTCTGTGTATAAAATTCTACAATTTGCATTCCAAAGCCTTGGAATAGTGTATGGAGATTTGGGGACTTCCCCTTTATATGTCTTCTATAACACATTCCCTGATGGAGTTGAAAATACGGAGGACTTGATAGGAGCTCTGTCATTGATTATATACTCTCTAACTCTCATAACCCTCATCAAGTACGTATTTATTGTCTGCAAGGCAAATGACAATGGTCAAGGTGGAACATTTGCTCTGTATTCATTGCTGAGCCGTCATGCTAAAATATTGACTATTCCTAACCATGACCTCAGCGATGAGAAGCTTACAACTTATAGTTGTTCTGTGTTTCGGGAACAATCATTTGCTGCAAAAACTAAGAGATGGCTGGAAGGGCATCATGTTAAGAAACATGCAATTCTTATTCTCGTTCTTGTTGGCTCTTGCATGGTGATTGGGGATGGAATTCTAACACCTGCTATTTCTGTTCTTTCTGCTGTTGGGGGGATCAACGTTGGTCGTGCAAAAATAAGCGGTGATGTTGCTGTTCTTGTTGCCATTGTCATACTTATTTTCTTGTTTAGCATGCAACGTTATGGCACAGATAAAGTTGGTTGGCTTTTTGCCCCGGTAGTTTTTCTGTGGTTCATCTTAATAGGAGGCATCGGCATATTTAACATCTGCAAATATGATTACACTGTCTTGAGAGCCCTTTCGCCAGTACATATATATCGGTACTTCAAAAGGGGAGGGAAAGATGGATGGACATCTCTTGGAGGGATCATGCTTTGTATTACAGGAACTGAAGCACTTTTTGCAGACCTGTCCCATTTTCCAGCTTCCTCCATACAAATTGCTTTTACAGTAGTCGTATTTCCTTGCCTTCTTTTAGCCTACACTGGACAAGTTGCCTATCTCATGAAACACCCACATTATGTTGTCGGTGCCTTCTACCATTCAATCCCAGAAAGTATATATTGGCCTGTATTTCTTGTTGCAACTACCGCCGCTATCGTTGCAAGCCAAGCCACCATATCTGCAACCTTTTCAGTAGTCAAGCAAGCCCTTGCACTTGGTTGCTTTCCAAGAGTTAAAGTTGTTCATACTTCTATGATGTTCCCTAATCAGATATATATTCCTGATATTAATTGGATCCTGATGGTCCTTTGCATTGCCGTGACAGCTGGGTTCAAAAATCAAACCCAAATTGGAAATGCTTCTGGGACAGCAGTGATTATAGTGATGTTGGTAACCACATTCCTCATGACTTTAATAATGATATTAGTGTGGCATTCCCATTGGAGTCTAGTTCTGCTCTTCACTTGCTTATCACTGATTGTGGAGGGTTTCTACCTCTCCTCAGTTATTCAGAAGGTTTATCAAGGTGGCTGGGTTCCGCTGGTTATAGCAACGGCATTTTTCATCATCATGTACATTTGGCATTATGGTACGGCTAAACGTTATGATATTGAGATGCACACTAAGGTTTCAATGGCATGGATTCTTAGCCTTGGCCCCAGTTTAGGACTTGTAAGGGTGCCTGGGATAGGACTTGTGTACACGGAACTAGCAAGCGGCGTCCCCCACATATTTTCACACTTCATCACAAACTTACCCGCCATTCATTCGGTTGTGGTTTTTGTGTGTTTGAAGTGTTTGCCTGTCCACACAGTTCCAGAAGAAGAGAGATTTCTAGTCAAACGGATTGGACCAAAGAATTTTCGCATGTTTCGATGTGTAGCTAGATTTGGTTACAAAGACCTCCACAAGAAAGATGATGACTTTGAGAAGAAACTCTTTGATAGCATTTTCTTGTTTGTTCGACTTGAGTCGTTGATGGATGGTGGATCTTCAGATTCGGACGTGTCTAGTCTACTTGATGAACAAAATGAAACAGTTATCGATTGCACATTGAAAGCCATTAGTTCATCTGTGGAATCAACAGCCCTTCAAATGGCAGACTCAATTGAGATTTCCAATTCTCCATTGCATCAAAACGTATCCTTCATAACATCCGATCGAGAAAATGATCAGACCGAGGCAGATGAGCTAGAATTCTTGGTTAGCAGTAAAAACGTTGGAGTCGTACACTTTCTCGGAAATACAGTAATGAAAGCAAGGAGGGACTCTAGATTCTGTAAAAAGATAGCTATCGATTATATATATGCCTTTCTTAGAAAGATCTGCAGGGAGAACAGCGTGATGTTTAATGTTCCCCATGAGAGTTTGCTTAATGTTGGTCAAACATTCTATGTATGA 2373 41.0 MASGFETGDYTNDKDNSIWVLDRQIDQSMEEESKRLRNVHQEKDHSVYKILQFAFQSLGIVYGDLGTSPLYVFYNTFPDGVENTEDLIGALSLIIYSLTLITLIKYVFIVCKANDNGQGGTFALYSLLSRHAKILTIPNHDLSDEKLTTYSCSVFREQSFAAKTKRWLEGHHVKKHAILILVLVGSCMVIGDGILTPAISVLSAVGGINVGRAKISGDVAVLVAIVILIFLFSMQRYGTDKVGWLFAPVVFLWFILIGGIGIFNICKYDYTVLRALSPVHIYRYFKRGGKDGWTSLGGIMLCITGTEALFADLSHFPASSIQIAFTVVVFPCLLLAYTGQVAYLMKHPHYVVGAFYHSIPESIYWPVFLVATTAAIVASQATISATFSVVKQALALGCFPRVKVVHTSMMFPNQIYIPDINWILMVLCIAVTAGFKNQTQIGNASGTAVIIVMLVTTFLMTLIMILVWHSHWSLVLLFTCLSLIVEGFYLSSVIQKVYQGGWVPLVIATAFFIIMYIWHYGTAKRYDIEMHTKVSMAWILSLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCLKCLPVHTVPEEERFLVKRIGPKNFRMFRCVARFGYKDLHKKDDDFEKKLFDSIFLFVRLESLMDGGSSDSDVSSLLDEQNETVIDCTLKAISSSVESTALQMADSIEISNSPLHQNVSFITSDRENDQTEADELEFLVSSKNVGVVHFLGNTVMKARRDSRFCKKIAIDYIYAFLRKICRENSVMFNVPHESLLNVGQTFYV 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22839730 22845271 + MELO3C002408.2.1 Cme12g01537 344754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01537 790 PANTHER POTASSIUM TRANSPORTER 6 789 - -
Cme12g01537 790 TIGRFAM kup: potassium uptake protein 54 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g01537 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 6 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cme12g01537 790 Pfam K+ potassium transporter 54 625 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01908 Cme-Chr4:26778147 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme10g01233 Cme-Chr10:12843721 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme10g01737 Cme-Chr10:24470807 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme12g00060 Cme-Chr12:594523 Cme12g01537 Cme-Chr12:22839730 0 dispersed
Cme12g01536 Cme-Chr12:22831842 Cme12g01537 Cme-Chr12:22839730 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01537 K03549 - csv:101217671 1430.62