Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01592 ATGGCTACGGCTCAGCAGATATTGAATAGCCTTAATACGCCTAAGGATGTTCGAGACGATATGCTTTTGATCTTCTCTAGTTTTGATAATCGTCTTTCTAATATCACCAGTTTGGTCAATAGTGGGGATTCGAAGAAAGAGGAGGATCGATTCGAAGCTGCGGAGAAGGTGATTCTTCGTTGGGATTCTGGTCATGGAGCTTCTCGGAACTCGATTAATTGGGAGGACTCGCCAGATGAGGCGGCTGAGTATTTAACTGCGGTTGATGATATTATTCAGTGGATCGACGACTTGTCGATTCGTTCGGATTCTGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAGCACCGTTCCTCTCGATGCGGACCATCTCTACGGTTCAATTCGTAAGGTTTCCCTCTCTTTTGCTTCACACGACAGCGAAAATTCCGATGAATTTGAGTCGTTTGCTGATGCTCACCGTGGTTCCGGAATCTATCATGAGCGTGGTGTCAGTTTGGGAGATGATTTGCGGGTTGATTTGATCCATCCTGACGCCGTTGTTGATTTGAAGGAGATCGCCGACCGGATGATTCGGTCTGGATACGAGAAAGAGTGTGTTAATGTGTATACTGGTGTTCGTCGCGATGCTTTAGATGAGTGCTTGGTTGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTTCAGAAAATTGACTGGAAAATCTTAGACGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGCGTTCGAGTACTTTTGACGGGGGAGAAGCGACTGTGCGACTATATCTTTAGTGGCTCCGATGATTCTGAGGAAGTCTGCTTCAATGAGACTGCCAAAGGGTGCATCAGACAATTACTGAATTTTGCAGAAGCCATTGCTATAGGGGAAAGGTCAGTGGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAATACGTTTTCCCAGAATTGCAGGCTATGGTCACTGATGAATTTGTGATCGAGGAGGCGCGAGGAGTACTTTCTAGGCTGGGAGAGGCCGCCAAAGGTACATTTGTTGAATTTGAGAATGCTGTTCGGAGTGAAACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGTTATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGTAAGACTCTTGATGCACTTTTAGAAGGTGACGATGAGGATTTGCATCACCTAGGGGTTGATGGTGCTGAAAATTTGGAGTTAGAAACTATGTCACCTTTAGGTCGTCGTTTGTTTTCATTGATAGCAACACTGGAGACCAATCTAGAGAGAAAATCCAAACTCTATGGTGATGATTCAATACAATATATATTCCTCATGAACAATATACAATATATTGTGCAAAAAGTGAAAGATTCTGAGCTTGGAAAGCTTTTGGGCGACCGCTGGGTACGGAAGCGCCGAGGCCAGGTTCGCATATATGCAACAAACTATCTTAGGGCGTCTTGGGGCAAATTATTATCTTTTTTGAAGGAAGAAGGTACTGGTGGGAGCTCCAACAGTGCCCTGAAACTAGCTACTTTGAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAAATCTATAGAGTTCAGACAGGTTGGAAGGTTCCAGATGCTCAACTACGAGAAGAGCTCCGAATTTCAGTGTCCGCAAAAGCTCTACCTGCTTATCGTGCCTTCTTGGGAAGACATGGAAGTCAGTTAGAGAATACAAGACATGCTGGGAGGTATATAAAGTACACATCAGATGACTTGGAAGGCTATCTATTGGATTTGTTTGAAGGATCATCTTGTGTTATACATCACTTACGAAGAAAAAGTAGTTCATAG 1914 43.52 MATAQQILNSLNTPKDVRDDMLLIFSSFDNRLSNITSLVNSGDSKKEEDRFEAAEKVILRWDSGHGASRNSINWEDSPDEAAEYLTAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHMLIRSTVPLDADHLYGSIRKVSLSFASHDSENSDEFESFADAHRGSGIYHERGVSLGDDLRVDLIHPDAVVDLKEIADRMIRSGYEKECVNVYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTGEKRLCDYIFSGSDDSEEVCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALEYVFPELQAMVTDEFVIEEARGVLSRLGEAAKGTFVEFENAVRSETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDALLEGDDEDLHHLGVDGAENLELETMSPLGRRLFSLIATLETNLERKSKLYGDDSIQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLSFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEEIYRVQTGWKVPDAQLREELRISVSAKALPAYRAFLGRHGSQLENTRHAGRYIKYTSDDLEGYLLDLFEGSSCVIHHLRRKSSS 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 23218332 23220537 + MELO3C002359.2.1 Cme12g01592 344809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01592 637 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 34 635 - -
Cme12g01592 637 SUPERFAMILY Cullin repeat-like 51 622 IPR016159 -
Cme12g01592 637 Gene3D Exocyst complex component Exo70 65 627 - -
Cme12g01592 637 Pfam Exo70 exocyst complex subunit 259 618 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cme12g01592 637 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 635 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme02g00990 Cme-Chr2:14729508 Cme12g01592 Cme-Chr12:23218332 0 dispersed
Cme04g01362 Cme-Chr4:19219097 Cme12g01592 Cme-Chr12:23218332 2.75E-154 dispersed
Cme10g00165 Cme-Chr10:1139854 Cme12g01592 Cme-Chr12:23218332 8.12E-114 dispersed
Cme11g01259 Cme-Chr11:19404241 Cme12g01592 Cme-Chr12:23218332 2.98E-104 dispersed
Cme12g00048 Cme-Chr12:469752 Cme12g01592 Cme-Chr12:23218332 4.93E-125 dispersed
Cme12g01592 Cme-Chr12:23218332 Cme12g01942 Cme-Chr12:25362669 5.81E-129 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01592 K07195 - csv:101212753 1231.08