Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme12g01647 | ATGGAGTACATGAAATGTGTTATAAGAGAATCTCTAAGGCTCCATCCTCCTCTTCCCCTCTTGCTGCCAAGAGAAACAATGGAAAGTGTCAACCTTGAAGGTTACCATATTCCACCAAAAACAACGGTTTGGATCAATGTTTGGGCAATTCAAAGAGACCCCATGATGTGGGAAAACCCAGATAAGTTCATACCAGAGAGATTCATGGAGGAAAAGAAATCAGTTGATTTCAAAGGTCATGACTTTGAGTTCATTCCATTTGGGAGTGGAAGAAGGAAGTGCATTGGAATGTCATTTGGGATTGCTTCTTTTGAATATGTATTGGCCAATCTTCTTCATTGGTTTGATTGGAAGCTTCCAGATGGGGAGTTGTTGGATATGACTGAAGAAAATGGTCTTTCTGTTTTTAAGAAACTTCCTCTCAAGCTTATCCCAATTCCATTTTCTCCCTAA | 453 | 39.74 | MEYMKCVIRESLRLHPPLPLLLPRETMESVNLEGYHIPPKTTVWINVWAIQRDPMMWENPDKFIPERFMEEKKSVDFKGHDFEFIPFGSGRRKCIGMSFGIASFEYVLANLLHWFDWKLPDGELLDMTEENGLSVFKKLPLKLIPIPFSP | 150 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 23570685 | 23571191 | + | MELO3C000613.2.1 | Cme12g01647 | 344864 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme12g01647 | 150 | Pfam | Cytochrome P450 | 1 | 143 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PRINTS | P450 superfamily signature | 85 | 94 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PRINTS | P450 superfamily signature | 94 | 105 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PRINTS | P450 superfamily signature | 6 | 17 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PANTHER | CYTOCHROME P450 71B11-RELATED | 1 | 147 | - | - | |
Cme12g01647 | 150 | Gene3D | Cytochrome P450 | 1 | 143 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PRINTS | E-class P450 group I signature | 5 | 23 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PRINTS | E-class P450 group I signature | 94 | 117 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PRINTS | E-class P450 group I signature | 46 | 70 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | PRINTS | E-class P450 group I signature | 84 | 94 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cme12g01647 | 150 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 87 | 96 | IPR017972 | GO:0005506|GO:0016705 | |
Cme12g01647 | 150 | PANTHER | CYTOCHROME P450 FAMILY 71 PROTEIN | 1 | 147 | - | - | |
Cme12g01647 | 150 | SUPERFAMILY | Cytochrome P450 | 1 | 147 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme12g01647 | Cme-Chr12:23570685 | Cme12g01649 | Cme-Chr12:23585241 | 1.86E-70 | dispersed | |
Cme12g01647 | Cme-Chr12:23570685 | Cme12g01648 | Cme-Chr12:23574628 | 1.70E-82 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme12g01647 | K20617 | - | csv:101208836 | 292.352 |