Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01647 ATGGAGTACATGAAATGTGTTATAAGAGAATCTCTAAGGCTCCATCCTCCTCTTCCCCTCTTGCTGCCAAGAGAAACAATGGAAAGTGTCAACCTTGAAGGTTACCATATTCCACCAAAAACAACGGTTTGGATCAATGTTTGGGCAATTCAAAGAGACCCCATGATGTGGGAAAACCCAGATAAGTTCATACCAGAGAGATTCATGGAGGAAAAGAAATCAGTTGATTTCAAAGGTCATGACTTTGAGTTCATTCCATTTGGGAGTGGAAGAAGGAAGTGCATTGGAATGTCATTTGGGATTGCTTCTTTTGAATATGTATTGGCCAATCTTCTTCATTGGTTTGATTGGAAGCTTCCAGATGGGGAGTTGTTGGATATGACTGAAGAAAATGGTCTTTCTGTTTTTAAGAAACTTCCTCTCAAGCTTATCCCAATTCCATTTTCTCCCTAA 453 39.74 MEYMKCVIRESLRLHPPLPLLLPRETMESVNLEGYHIPPKTTVWINVWAIQRDPMMWENPDKFIPERFMEEKKSVDFKGHDFEFIPFGSGRRKCIGMSFGIASFEYVLANLLHWFDWKLPDGELLDMTEENGLSVFKKLPLKLIPIPFSP 150
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 23570685 23571191 + MELO3C000613.2.1 Cme12g01647 344864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01647 150 Pfam Cytochrome P450 1 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PRINTS P450 superfamily signature 85 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PRINTS P450 superfamily signature 94 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PRINTS P450 superfamily signature 6 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PANTHER CYTOCHROME P450 71B11-RELATED 1 147 - -
Cme12g01647 150 Gene3D Cytochrome P450 1 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PRINTS E-class P450 group I signature 5 23 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PRINTS E-class P450 group I signature 94 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PRINTS E-class P450 group I signature 46 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 PRINTS E-class P450 group I signature 84 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01647 150 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 87 96 IPR017972 GO:0005506|GO:0016705
Cme12g01647 150 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 147 - -
Cme12g01647 150 SUPERFAMILY Cytochrome P450 1 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g01647 Cme-Chr12:23570685 Cme12g01649 Cme-Chr12:23585241 1.86E-70 dispersed
Cme12g01647 Cme-Chr12:23570685 Cme12g01648 Cme-Chr12:23574628 1.70E-82 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01647 K20617 - csv:101208836 292.352