Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01651 ATGTTTGTTGGTGGAAGTGACACAACAGCAACAGGATTGGAATGGACAATGGCAGAGCTGATGAGAAAACCAAGAATCATGAAGAGAGTACAAGAAGAAGTTAGGACAATAATTGGCAAAAAGTCAAAGATAGAAGCAGAAGACATTCAAAAAATGGAATACATGCAATGTGTGATTAAAGAATCTCTAAGGCTTCACCCACCCGTTCCTCTTTTAGTGCCAAGAGAATCAATGGCGGACGTTGAGATAGAAGGTTACTACATTCCATCAAAAACAAGAGTGTTTGTGAATGCTTGGGCCATTCAAAGAGACTCTCAATGTTGGGATAATCCAAATGAGTTCATTCCAGAGAGATTTATGGACAGAACTAATTCAGCCGATTATAAAGGTCAAAACTTTGAGTTCATTCCATTTGGTAGTGGAAGAAGGAAGTGTCCTGGA 441 39.23 MFVGGSDTTATGLEWTMAELMRKPRIMKRVQEEVRTIIGKKSKIEAEDIQKMEYMQCVIKESLRLHPPVPLLVPRESMADVEIEGYYIPSKTRVFVNAWAIQRDSQCWDNPNEFIPERFMDRTNSADYKGQNFEFIPFGSGRRKCPG 147
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 23600793 23601235 + MELO3C001005.2.1 Cme12g01651 344868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01651 147 Gene3D Cytochrome P450 1 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PANTHER CYTOCHROME P450 71B11-RELATED 1 147 - -
Cme12g01651 147 Pfam Cytochrome P450 1 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 147 - -
Cme12g01651 147 Coils Coil 27 47 - -
Cme12g01651 147 PRINTS E-class P450 group I signature 145 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 SUPERFAMILY Cytochrome P450 1 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS P450 superfamily signature 136 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS P450 superfamily signature 145 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cme12g01651 147 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g01651 Cme-Chr12:23600793 Cme12g01649 Cme-Chr12:23585241 1.79E-70 dispersed
Cme12g01651 Cme-Chr12:23600793 Cme12g01653 Cme-Chr12:23608166 1.48E-64 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01651 K20617 - csv:116402966 291.197