Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01692 ATGGAGGAAACATTTTTTCCATTTCGTGGGATTAAGAATGATATAAGAGGAAGACTTATGTGCTACAGACAGGATTGGACTGGCGGCTTTCGCACCGGTATCAGGATCTTGGCCCCAACAACGTACATATTCTTTGCTTCAGCAATTCCGTCTGCTCAGATATGTTTCTCTTTCATGTGTGTCGTAGATGGGACTCTAACTGCTGTACAAACTCTAGCATCAACAGCACTGTGTGGCATCATCCACTCAGTTTTTGGAGGACAACCTCTGCTCATCCTTGGTGTTGCTGAACCAACTGTTTTGATGTATACGTTCATGTTCAACTTTGCAAAGGACCGAAAGGAACTGGGGCAGGAACTATTCTTAGCCTGGACGGGATGGGTATGTGTATGGACAGCCATTTTGCTTTTTTTGCTAGCGGTACTGGGTGCATGCTCCTTGATCAATAGATTCACACGTCTTGCTGGAGAATTGTTTGGTCTGCTAATTGCCATGCTCTTCATGCAGCAGGCGATACGTGGTGTAGTGGAGGAATTTGGCATACCCCAAAGGGAAAATCCTAATCAGGTGTCCCTCCAAACTTCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTGCTGTCCTTTGGGCTTCTGCTAACTGCCCTAAAAAGCCGCAAGGCTAGATCATGGCGCTATGGAACTGGTTGCCTACGTGGCTTTATTGCTGATTATGGAGTTCCACTTATGGTGCTCATATGGACAGCCTTATCTTACATTCCAGTCAACAATGTACCACTTGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCCTACTCTAATTGGACGGTTATAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAACTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCTTATCATTATGATCTTCTTCTCCTAGGTTTTCTTGTTATCCTGTGTGGACTTATTGGCATACCACCTGCCAATGGTGTAATTCCTCAGTCTCCTATGCACACGAAAAGCTTAGCTACCCTCAAACATCAGCTCTTGCGAAGCAAGCTGGTTGCAGCAGCACGACAAAGTTTCCGTAAAAATTCGAACTTAAGTCAATTTTACCAGAACATGCAAGAGGCATACAACGGGATGCAGACTCCTTTAATTTATCAAAATCCACCACCTGCGGGGCTGAAGGAGTTGAAGGATTCCACCATCCAATTAGCTTCAAGAACTGGCTACATTGATGCACCTGTTGATGAAACCGTTTTCGATGTGGACAAAGATATTGATGATCTTCTGCCTGTAGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAGTAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATCCCAACTTCGGTTCTTTGGGGTTACTTTGCTTTCATGGCAATTGAGAGCTTGCCTGGAAATCAATTCTGGGAAAGGATTTTACTGCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTGGAGGAATATCATGCAACCTTTCTAGAAACAGTCCCCTTCAAAACAATTGCCACTTTCACCTTGTTCCAGACAGTATATTTGCTGATGTGTTTTGGTCTAACCTGGATTCCAATTGCTGGTGTTCTTTTTCCACTGTTGATCATGCTTCTTGTCCCTGTGCGGCAGTATTTGCTTCCCAAGTTCTTCAAAGGTGCTCATCTCCAGGACTTGGATGCTGCTGAATACGAGGAGGCTCCTGCAATCGCCTTTAATCCATCATTCGAAGATCGAATGGGAAGAACTCCCAATATTGATGATGGTGAAATACTTGACGAGATGATCACAAGAAGCCGTGGCGAGATTCGACGTACTCCAAGTTCGAAAGTGACAAGCTCATCCCCAACTACTCTAGAGGGCATCAAATCAGTCTATAGTCCACAGATACCACAGAAACTTTATAGTCCAAGAATCAACGAGCTGAGAAGGGAGAGAAGTTCTTTATCTCCTGGAAAAGGACTTGATTTTAAGCTAAATGGCAGTCCTAGTCCTAGTGAAGAGCCAAGACCAGGACCTTCTTTTAGAAATTAG 2154 44.01 MEETFFPFRGIKNDIRGRLMCYRQDWTGGFRTGIRILAPTTYIFFASAIPSAQICFSFMCVVDGTLTAVQTLASTALCGIIHSVFGGQPLLILGVAEPTVLMYTFMFNFAKDRKELGQELFLAWTGWVCVWTAILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQVSLQTSWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGFIADYGVPLMVLIWTALSYIPVNNVPLGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRSKLVAAARQSFRKNSNLSQFYQNMQEAYNGMQTPLIYQNPPPAGLKELKDSTIQLASRTGYIDAPVDETVFDVDKDIDDLLPVEVKEQRLSNLLQAVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPAIAFNPSFEDRMGRTPNIDDGEILDEMITRSRGEIRRTPSSKVTSSSPTTLEGIKSVYSPQIPQKLYSPRINELRRERSSLSPGKGLDFKLNGSPSPSEEPRPGPSFRN 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 23807349 23813886 - MELO3C002269.2.1 Cme12g01692 344909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01692 717 Pfam HCO3- transporter family 201 373 IPR011531 GO:0006820|GO:0016021
Cme12g01692 717 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Cme12g01692 717 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Cme12g01692 717 MobiDBLite consensus disorder prediction 682 717 - -
Cme12g01692 717 MobiDBLite consensus disorder prediction 646 663 - -
Cme12g01692 717 PANTHER BORON TRANSPORTER 2-RELATED 1 692 - -
Cme12g01692 717 PANTHER ANION EXCHANGE PROTEIN 1 692 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cme12g01692 717 MobiDBLite consensus disorder prediction 642 663 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme04g01046 Cme-Chr4:14351771 Cme12g01692 Cme-Chr12:23807349 0 dispersed
Cme04g01067 Cme-Chr4:14530154 Cme12g01692 Cme-Chr12:23807349 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01692 K24194 - csv:101203606 1362.05