Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01755 ATGGCGCCGGTTTTATCTCGGTTACTTCTCCGACGGAATGTTCACACACCATTTCTTCGCACCTCCACCACGGCCTTTAGCTCTTTCAGAACGGTTCATTCTATGGTTTTCTCCACTGTAGAAGTGGACCAAATATCAGGTTCTAAGCCAGGAGACGGTAAATGGATTGGATCGTCCGGTTGGAATACTATTGTAGATCCTCTAAATGGAGAACCATTTATTAGAGTTGCCGAAATCGACGAAACAGAGATTCAGCCATTTGTGAAGAGTCTGACCAAATGCCCAAAGCATGGCTTACACAATCCTTTCAAATCGCCTGAGAGATATTTGTTGTTTGGAGATGTATCTTCCAAGGCTGCTGACGTGCTTTCCAAGCCAGAGGTGACTGACTTCTTCGCAAGGCTAATTCAAAGAGTTTCTCCAAAAAGTTATCAGCAAGCTTGTGCTGAAGTAAACGTTACTGTTAAATTTCTACGGAACTTCTCTGGCGATCAGGTTCGCTTCCTAGCAAGGTCCTTTGCAGTACCTGGAGATCATCTTGGACAACAAAGTCATGGTTTCCGTTGGCCTTATGGTCCCGTTGCGATTGTCACTCCTTTCAACTTTCCATTAGAAATTCCTGTACTTCAGTTGATGGGTGCACTTTACATGGGCAACAAACCCGTTTTAAAAGTCGATAGCAAGGTTAGCATTGTTATGGAGCAAATGATTCGATTGCTTCACCATTGTGGACTACCTCTAGAAGATTTAGATTTTATAAATTGTGATGGGAAGACCATGAACAAGTTATTGATGGAGGCAAATCCATCCATGACTCTTTTCACCGGAAGCTCAAGGGTGGCAGATAAGTTAGCTGTTGACTTGAAGGGCCGCATTAAATTGGAAGATGCAGGTTTTGATTGGAAAGTCTTAGGACCAGATGTTCGAGAGGAAGACTATGTTGCATGGGTTTGTGATCAAGATGCATATGCTTGTAGTGGCCAAAAGTGTTCAGCACAGTCTATACTGTTTATGCATGAGAATTGGTCAACCACTTCGCTTATTTCGAAGATAAAGGATCTTGCAGAGAGAAGAAATTTGACCGATTTAACAATTGGCCCAGTTCTTACATTGACAACGGAAGCGATACTAGATCACATGAATAAATTGCTCAAGATTCCAGGGGCAAAGTTGCTTTTTGGAGGTGAACCTCTAAAAAACCATTCTATTCCATCCATATATGGAGCTATAAAACCCACTGCATTATATATTCCACTTGAAGAAATGATGAAAGATGAGAACTATGAGCTTGTGACCAAGGAAATTTTTGGACCATTCCAGATTGTTACGGAATACAAGAGAGATCAACTTTCGGTTGTGTTGGATGCTCTTGAGCGAATGCATGCTCATCTAACTGCTGCCGTTGTTTCAAATGACCCTCTTTTCTTGCAGGAAGTTATTGGCAAAACTGTGAATGGAACAACATACGTAGGTTTGGACCTGCAGGAGACCCTAGAGGTGCAGGTATTGGAACCCCGGAAGCCATCAAACTCGTATGGTCTTGCCATAGAGAGATCATATATGATATTGGCCCATTACCCTCGCATTGGAAAATTCCATCAGCTACTTGATGAAATATGA 1620 42.28 MAPVLSRLLLRRNVHTPFLRTSTTAFSSFRTVHSMVFSTVEVDQISGSKPGDGKWIGSSGWNTIVDPLNGEPFIRVAEIDETEIQPFVKSLTKCPKHGLHNPFKSPERYLLFGDVSSKAADVLSKPEVTDFFARLIQRVSPKSYQQACAEVNVTVKFLRNFSGDQVRFLARSFAVPGDHLGQQSHGFRWPYGPVAIVTPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMIRLLHHCGLPLEDLDFINCDGKTMNKLLMEANPSMTLFTGSSRVADKLAVDLKGRIKLEDAGFDWKVLGPDVREEDYVAWVCDQDAYACSGQKCSAQSILFMHENWSTTSLISKIKDLAERRNLTDLTIGPVLTLTTEAILDHMNKLLKIPGAKLLFGGEPLKNHSIPSIYGAIKPTALYIPLEEMMKDENYELVTKEIFGPFQIVTEYKRDQLSVVLDALERMHAHLTAAVVSNDPLFLQEVIGKTVNGTTYVGLDLQETLEVQVLEPRKPSNSYGLAIERSYMILAHYPRIGKFHQLLDEI 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 24219398 24225071 - MELO3C002203.2.1 Cme12g01755 344972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01755 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 323 334 IPR016160 GO:0016491
Cme12g01755 539 Pfam Aldehyde dehydrogenase family 63 490 IPR015590 GO:0016491
Cme12g01755 539 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE 12A1, MITOCHONDRIAL 26 494 - -
Cme12g01755 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 302 491 IPR016163 GO:0016620
Cme12g01755 539 SUPERFAMILY ALDH-like 52 491 IPR016161 GO:0016491
Cme12g01755 539 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 26 494 IPR044638 GO:0004029
Cme12g01755 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 51 300 IPR016162 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme12g01755 Cme-Chr12:24219398 Cme02g01959 Cme-Chr2:25859064 2.84E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01755 K00294 - csv:101214440 957.977