Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cme12g01777 | ATGCCGCCGAGACGATACGCTTTTGGACGGGCCGATGAGGCCACCCACCCCGACTCCATTCGTGCCACCTTGGCTGAGTTCATTTCCACTTTCATCTTCGTCTTCGCTGGCGAAGGCTCCGTTCTCGCTCTTGATAAAATTTTCAGGCCAGCGGATTATGGAAGTTACGGCCATGGAAGTTACGGCCGAGGAGGTCACGGTTATGGTCACGGATATGGTAGAAAGGGGGCCGACACAGGGAGAGCTGCGTCGGATTTAGTAGTGATAGCGATAGCACACGCGTTTGCACTGTTCTCGGCGGTGGCAGCGAGCATCAACATATCGGGTGGGCATGTGAATCCTGCAGTAACGTTTGGGGCCCTTATTGGAGGGAGGATCTCTCTTATCCGTGCATTCTTCTATTGGGTTGCACAGATTTTGGGTGCCATTATCGCTTCACTTCTCTTGAGACTTGCAACGGGTGGCATGAGGCCTATGGGTTTCTTTGTTTCATCAGGCGTATCAGAATTGCACGGGTTCCTACTAGAGATAATCCTTACATTTGCTTTGGTCTACACAGTATACGCAACAGCAATAGACCCGAAGAGGGGCAGCTTGGGAACAATAGCACCACTGGCAATCGGGTTAATAGTCGGGGCCAATATTCTGGTGGGTGGGGCCTTCGATGGGGCCTGCATGAACCCAGCAAGGGCATTTGGGCCGTCTTTAGTGGGCTGGAGATGGGACAATCATTGGATCTATTGGATCGGCCCATTACTGGGAGGTGGGCTTGCGGCCCTTGTATATGAGTACTTGGTCATTCCGGTTGAACCTCCTCTACATACTCACCAGCCCTTGGCTCCAGAGGATTACTAA | 855 | 52.4 | MPPRRYAFGRADEATHPDSIRATLAEFISTFIFVFAGEGSVLALDKIFRPADYGSYGHGSYGRGGHGYGHGYGRKGADTGRAASDLVVIAIAHAFALFSAVAASINISGGHVNPAVTFGALIGGRISLIRAFFYWVAQILGAIIASLLLRLATGGMRPMGFFVSSGVSELHGFLLEIILTFALVYTVYATAIDPKRGSLGTIAPLAIGLIVGANILVGGAFDGACMNPARAFGPSLVGWRWDNHWIYWIGPLLGGGLAALVYEYLVIPVEPPLHTHQPLAPEDY | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 24357524 | 24359974 | - | MELO3C002183.2.1 | Cme12g01777 | 344994 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cme12g01777 | 284 | CDD | MIP | 21 | 265 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme12g01777 | 284 | Gene3D | Glycerol uptake facilitator protein. | 5 | 270 | IPR023271 | - | |
Cme12g01777 | 284 | ProSitePatterns | MIP family signature. | 111 | 119 | IPR022357 | - | |
Cme12g01777 | 284 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme12g01777 | 284 | PRINTS | Major intrinsic protein family signature | 130 | 149 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme12g01777 | 284 | PRINTS | Major intrinsic protein family signature | 175 | 193 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme12g01777 | 284 | PRINTS | Major intrinsic protein family signature | 208 | 230 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme12g01777 | 284 | PRINTS | Major intrinsic protein family signature | 245 | 265 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme12g01777 | 284 | SUPERFAMILY | Aquaporin-like | 13 | 275 | IPR023271 | - | |
Cme12g01777 | 284 | TIGRFAM | MIP: MIP family channel proteins | 25 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cme12g01777 | 284 | PANTHER | AQUAPORIN-8 | 77 | 284 | IPR034294 | - | |
Cme12g01777 | 284 | PANTHER | AQUAPORIN-8 | 3 | 49 | IPR034294 | - | |
Cme12g01777 | 284 | PANTHER | - | 77 | 284 | - | - | |
Cme12g01777 | 284 | PANTHER | - | 3 | 49 | - | - | |
Cme12g01777 | 284 | Pfam | Major intrinsic protein | 14 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cme04g02488 | Cme-Chr4:31313855 | Cme12g01777 | Cme-Chr12:24357524 | 3.78E-94 | dispersed | |
Cme09g00564 | Cme-Chr9:5803978 | Cme12g01777 | Cme-Chr12:24357524 | 2.41E-46 | dispersed | |
Cme09g00565 | Cme-Chr9:5810542 | Cme12g01777 | Cme-Chr12:24357524 | 1.52E-41 | dispersed | |
Cme09g01609 | Cme-Chr9:20879919 | Cme12g01777 | Cme-Chr12:24357524 | 2.09E-76 | dispersed | |
Cme12g01777 | Cme-Chr12:24357524 | Cme08g02314 | Cme-Chr8:30107847 | 6.37E-35 | dispersed | |
Cme12g01777 | Cme-Chr12:24357524 | Cme08g01268 | Cme-Chr8:9177803 | 1.84E-101 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cme12g01777 | K09873 | - | csv:101208863 | 505.753 |