Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cme12g01900 ATGTCTTTTCTCCTCTGTTATTCACCCTTCAAACCTCTCCCACTTGCTTTCTTCTTCCTCATCCTCCTCTCCTTCCATTTCCTCCCAGCAATCAGCACTGATTTCCTTGTCGGCGACAGCGATGGCTGGTCAGTCCCTAAACCAAAAGAAGCTGACAAATACAACAAATGGGCTTCCCACAACAGATTCAATGTCGATGACACTGTCCATTTCAAGTACGAGAAAGATTCAGTGATGATGGTGACGGAGGAAGAGTACAAACAATGCGTTTCACCAAAGCCTCTGTTTTATGAAAACAATGGAGATAGTGTGGTAAAGCTTGACAGAGCAGGATTGTTCTATTTCATTAGTGGAGTTTCAGGGCATTGTCAGAAAGGTCAAAGAATGATAATCAAAGTGTTGGAACCTATGAGTCCTCCACAGCCATCCACTGTTCCACCTGAAGAAAAAAATGGTGCTGCACATTCCAAATTGGTCTCTGTTTCATCTTCATTCTTGGGGATTATTATGAATGAATGGTTGGTTTTGTTTGGAGATGTTGGATGA 546 42.49 MSFLLCYSPFKPLPLAFFFLILLSFHFLPAISTDFLVGDSDGWSVPKPKEADKYNKWASHNRFNVDDTVHFKYEKDSVMMVTEEEYKQCVSPKPLFYENNGDSVVKLDRAGLFYFISGVSGHCQKGQRMIIKVLEPMSPPQPSTVPPEEKNGAAHSKLVSVSSSFLGIIMNEWLVLFGDVG 181
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 25137341 25138305 + MELO3C002068.2.1 Cme12g01900 345117
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cme12g01900 181 CDD OsENODL1_like 33 134 IPR041846 -
Cme12g01900 181 PANTHER BLUE COPPER PROTEIN 16 162 IPR039391 GO:0009055
Cme12g01900 181 ProSiteProfiles Phytocyanin domain profile. 33 135 IPR003245 GO:0009055
Cme12g01900 181 Pfam Plastocyanin-like domain 50 127 IPR003245 GO:0009055
Cme12g01900 181 Gene3D - 31 138 IPR008972 -
Cme12g01900 181 SUPERFAMILY Cupredoxins 32 134 IPR008972 -
Cme12g01900 181 PANTHER EARLY NODULIN-LIKE PROTEIN 6 16 162 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cme05g00375 Cme-Chr5:2987651 Cme12g01900 Cme-Chr12:25137341 1.42E-25 dispersed
Cme09g00457 Cme-Chr9:4395940 Cme12g01900 Cme-Chr12:25137341 8.38E-45 dispersed
Cme11g01216 Cme-Chr11:18408529 Cme12g01900 Cme-Chr12:25137341 9.79E-26 dispersed
Cme12g01900 Cme-Chr12:25137341 Cme11g00759 Cme-Chr11:9434380 1.01E-17 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cme12g01900 - - cmo:103495780 314.694